G65236


Basic Information

Item Value
gene id G65236
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 19249186 ~ 19250162 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88060
CTTCTCCATTATCTCTTCCTCTCCATTATCTATACTTCTCCATTATCTCTACCTCTCCATTATCTATACTTCTCCATTATCTCTACCTCTCCATTATCTATACTTCTCCATTATCTCTACCTCTCCATTATCTATACTTCTCCATTATCTCTACCTCTCCATTATCTCTACCGCTCCATTATCTCTACTTCTCCATTATCTCTTCCTCTCCATTATCTATACTTctccattatctctctgtacagtacttgttctgttgtgtgtttatttgggttcCTCTAACTGAGTCTCGGTTCCTGATGTTCCTCCTCTCAGTCTGAGGAAGTTTCTCCTCCCGCTGCAGGACTGTTATCACTGTTACT

Function

GO:

id name namespace
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88060 True 362 lncRNA 0.40 2 19249186 19250162

Neighbor

gene id symbol gene type direction distance location
LOC103035518 nptx1l,LOC108435874 coding downstream 127726 19111133 ~ 19121460 (-)
LOC103035404 zgc:153845,LOC103035404,LOC108435855,LOC104925609,LOC106601411 coding downstream 530556 18717502 ~ 18718630 (-)
tspan10 NA coding downstream 659116 18586569 ~ 18590070 (-)
LOC103028209 NA coding downstream 674017 18567677 ~ 18575169 (-)
LOC103028836 NA coding downstream 698213 18538903 ~ 18550973 (-)
sema3c sema3c,LOC107680038,LOC107694195,LOC106576426 coding upstream 159136 19409298 ~ 19515383 (-)
lhfpl3 lhfpl3 coding upstream 415397 19665559 ~ 19714443 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding upstream 482593 19732755 ~ 19738419 (-)
acss3 acss3,LOC107755903,LOC107749070 coding upstream 803789 20053951 ~ 20064790 (-)
myf5 myf5,LOC107734855 coding upstream 932932 20183094 ~ 20189701 (-)
G65222 NA non-coding downstream 499 19139597 ~ 19248687 (-)
G65213 NA non-coding downstream 105076 19058448 ~ 19144110 (-)
G65185 NA non-coding downstream 340492 18901627 ~ 18908694 (-)
G65108 NA non-coding downstream 412754 18781871 ~ 18836432 (-)
G65111 NA non-coding downstream 413750 18833847 ~ 18835436 (-)
G65232 NA non-coding upstream 52732 19302894 ~ 19305411 (-)
G65251 NA non-coding upstream 128552 19378714 ~ 19384419 (-)
G65256 NA non-coding upstream 152182 19402344 ~ 19426200 (-)
G65267 NA non-coding upstream 260638 19510800 ~ 19574509 (-)
G65271 kdm7a,LOC106573199 non-coding upstream 329965 19580127 ~ 19588458 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other downstream 225528 18898185 ~ 19023658 (-)
LOC111192976 NA other downstream 536666 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other downstream 598843 18638307 ~ 18650343 (-)
G64886 NA other downstream 1318016 17928507 ~ 17931170 (-)
LOC103043390 NA other downstream 1559874 17678814 ~ 17689312 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 30140 19280302 ~ 19284032 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other upstream 55825 19305987 ~ 19370708 (-)
ndufb2 ndufb2 other upstream 350052 19600214 ~ 19605725 (-)
llph llph other upstream 544992 19795154 ~ 19799602 (-)
ost4 NA other upstream 2295256 21545418 ~ 21574199 (-)

Expression


Co-expression Network