G65267


Basic Information

Item Value
gene id G65267
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 19510800 ~ 19574509 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88113
taccacagaaacactgaataccacagaaacactgaataccacagaaacactgaataccacagaaacactatataccacagaaacactgaataccacagaaacactgaataccacagaaacactgaataccacagaaacactatataccacagaaacactgaataccacagaaacactataTACCACATACTCCTtccttgtgcaaaaataaaGCATACATGTTATGGCTGATGGACTG
>TU88114
acacagaaacactgaataccacagaaacactgaataccacagaaacactgaataccacagaaacactatataccacagaaacactgaataccacagaaacactgaataccacagaaacactgaataccacagaaacactatataccacagaaacactgaataccacagaaacactgaataccacagaaacactgaataccacagaaacactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88113 True 238 lncRNA 0.38 3 19510800 19574509
TU88114 False 212 lncRNA 0.38 2 19510895 19511179

Neighbor

gene id symbol gene type direction distance location
LOC103035518 nptx1l,LOC108435874 coding downstream 389340 19111133 ~ 19121460 (-)
LOC103035404 zgc:153845,LOC103035404,LOC108435855,LOC104925609,LOC106601411 coding downstream 792170 18717502 ~ 18718630 (-)
tspan10 NA coding downstream 920730 18586569 ~ 18590070 (-)
LOC103028209 NA coding downstream 935631 18567677 ~ 18575169 (-)
LOC103028836 NA coding downstream 959827 18538903 ~ 18550973 (-)
lhfpl3 lhfpl3 coding upstream 91050 19665559 ~ 19714443 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding upstream 158246 19732755 ~ 19738419 (-)
acss3 acss3,LOC107755903,LOC107749070 coding upstream 479442 20053951 ~ 20064790 (-)
myf5 myf5,LOC107734855 coding upstream 608585 20183094 ~ 20189701 (-)
myf6 myf6 coding upstream 627589 20202098 ~ 20205655 (-)
G65256 NA non-coding downstream 84600 19402344 ~ 19426200 (-)
G65251 NA non-coding downstream 126381 19378714 ~ 19384419 (-)
G65232 NA non-coding downstream 205389 19302894 ~ 19305411 (-)
G65236 NA non-coding downstream 260638 19249186 ~ 19250162 (-)
G65222 NA non-coding downstream 262113 19139597 ~ 19248687 (-)
G65271 kdm7a,LOC106573199 non-coding upstream 5618 19580127 ~ 19588458 (-)
G65273 NA non-coding upstream 17785 19592294 ~ 19593113 (-)
G65279 NA non-coding upstream 31781 19606290 ~ 19606501 (-)
G65276 NA non-coding upstream 34945 19609454 ~ 19610489 (-)
G65277 NA non-coding upstream 36426 19610935 ~ 19611878 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 140092 19305987 ~ 19370708 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other downstream 226768 19280302 ~ 19284032 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other downstream 487142 18898185 ~ 19023658 (-)
LOC111192976 NA other downstream 798280 18624875 ~ 18712520 (-)
ndufb2 ndufb2 other upstream 25705 19600214 ~ 19605725 (-)
llph llph other upstream 220645 19795154 ~ 19799602 (-)
ost4 NA other upstream 1970909 21545418 ~ 21574199 (-)
G65803 gen1 other upstream 2055449 21629958 ~ 21684828 (-)
G66081 bcap29 other upstream 2716176 22290685 ~ 22291682 (-)

Expression


Co-expression Network