ndufb2 (ndufb2)


Basic Information

Item Value
gene id ndufb2
gene name ndufb2
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 19600214 ~ 19605725 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88123
ATCAGAAGGTGACATTAGCAGGTTCCGGACGGGTTCGGGAGTTTAGAGTAGCGGGTAGAGAATGTCCACGATCGGGAGGACGGTGGGAATCTTCCGAGCCGGAGCTCAGGTCCTCCGCCGGGGGACCCAGCGAGTCCAGGTCCGCAGAGCGGGAGATGGTCCACACATCGAGGCCCAGTACAGACAGCCCCCACAGCTGACCAAACACCAGCAGTTCCATGCTGAGCTGCTGAGCGGAGCCATGTGGTTCTGGATCCTGTGGCACAGCTGGCATGACCCGGACGCAGTACTGGGTCATTTCCCCTGGCCGGACATGTCCGCATGGACAGACGAGGAGTTGGGAATCCCTCCTGATGATGAGTAAAAAGCTCCATGTTGTTCTGAATCCGGATTCTGATCAGAGGCTCCTCCAGACTCTCTCCAGTTCCAGACTGCTAAGAGTTAATTCTGTACAGAGACTTATTTATCAAGTCtgatttaataaagtttaattgtGTTAAAGTTCTGCTGCATTTTGCGAACATCTGTTAAACACGGGA
>XM_007232714.3
AGAGCGTGGTGCTGAAGGGCCGCTGTACAGGCTGGTATCAGAAGGTGACATTAGCAGGTTCCGGACGGGTTCGGGAGTTTAGAGTAGCGGGTAGAGAATGTCCACGATCGGGAGGACGGTGGGAATCTTCCGAGCCGGAGCTCAGGTCCTCCGCCGGGGGACCCAGCGAGTCCAGGTCCGCAGAGCGGGAGATGGTCCACACATCGAGGCCCAGTACAGACAGCCCCCACAGCTGACCAAACACCAGCAGTTCCATGCTGAGCTGCTGAGCGGAGCCATGTGGTTCTGGATCCTGTGGCACAGCTGGCATGACCCGGACGCAGTACTGGGTCATTTCCCCTGGCCGGACATGTCCGCATGGACAGACGAGGAGTTGGGAATCCCTCCTGATGATGAGTAAAAAGCTCCATGTTGTTCTGAATCCGGATTCTGATCAGAGGCTCCTCCAGACTCTCTCCAGTTCCAGACTGCTAAGAGTTAATTCTGTACAGAGACTTATTTATCAAGTCtgatttaataaagtttaattgtGTTAAAGTTC
>XM_007232715.3
CAATCAGAGAGCGTGGTGCTGAAGGGCCGCTGTACAGGCTGGTATCAGAAGGTGACATTAGCAGGTTCCGGACGGGTTCGGGAGTTTAGAGTAGCGGGTAGAGAATGTCCACGATCGGGAGGACGGTGGGAATCTTCCGAGCCGGAGCTCAGGTCCTCCGCCGGGGGACCCAGCGAGTCCAGGTCCGCAGAGCGGGAGATGGTCCACACATCGAGGCCCAGTACAGACAGCCCCCACAGCTGACCAAACACCAGCAGTTCCATGCTGAGCTGCTGAGCGGAGCCATGTGGTTCTGGATCCTGTGGCACAGCTGGCATGACCCGGACGCAGTACTGGGTCATTTCCCCTGGCCGGACATGTCCGCATGGACAGACGAGGAGTTGGGAATCCCTCCTGATGATGAGTAAAAAGCTCCATGTTGTGAGTATGAAGGTTCTGAATCCGGATTCTGATCAGAGGCTCCTCCAGACTCTCTCCAGTTCCAGACTGCTAAGAGTTAATTCTGTACAGAGACTTATTTATCAAGTCtgatttaataaagtttaattgtGTTAAAGTTC

Function

symbol description
ndufb2 Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Orthologous to human NDUFB2 (NADH:ubiquinone oxidoreductase subunit B2).

NR:

description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial

GO: NA

KEGG:

id description
K03958 NDUFB2; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
TU88123 False 539 TUCP 0.53 4 19600214 19605682
XM_007232714.3 False 541 mRNA 0.55 4 19600248 19605718
XM_007232715.3 True 560 mRNA 0.54 4 19600248 19605725

Neighbor

gene id symbol gene type direction distance location
sema3c sema3c,LOC107680038,LOC107694195,LOC106576426 coding downstream 84831 19409298 ~ 19515383 (-)
LOC103035518 nptx1l,LOC108435874 coding downstream 478754 19111133 ~ 19121460 (-)
LOC103035404 zgc:153845,LOC103035404,LOC108435855,LOC104925609,LOC106601411 coding downstream 881584 18717502 ~ 18718630 (-)
tspan10 NA coding downstream 1010144 18586569 ~ 18590070 (-)
LOC103028209 NA coding downstream 1025045 18567677 ~ 18575169 (-)
lhfpl3 lhfpl3 coding upstream 59834 19665559 ~ 19714443 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding upstream 127030 19732755 ~ 19738419 (-)
acss3 acss3,LOC107755903,LOC107749070 coding upstream 448226 20053951 ~ 20064790 (-)
myf5 myf5,LOC107734855 coding upstream 577369 20183094 ~ 20189701 (-)
myf6 myf6 coding upstream 596373 20202098 ~ 20205655 (-)
G65273 NA non-coding downstream 7101 19592294 ~ 19593113 (-)
G65271 kdm7a,LOC106573199 non-coding downstream 11756 19580127 ~ 19588458 (-)
G65267 NA non-coding downstream 25705 19510800 ~ 19574509 (-)
G65256 NA non-coding downstream 174014 19402344 ~ 19426200 (-)
G65251 NA non-coding downstream 215795 19378714 ~ 19384419 (-)
G65279 NA non-coding upstream 565 19606290 ~ 19606501 (-)
G65276 NA non-coding upstream 3729 19609454 ~ 19610489 (-)
G65277 NA non-coding upstream 5210 19610935 ~ 19611878 (-)
G65339 NA non-coding upstream 63822 19669547 ~ 19672117 (-)
G65347 NA non-coding upstream 121582 19727307 ~ 19849574 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 229506 19305987 ~ 19370708 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other downstream 316182 19280302 ~ 19284032 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other downstream 576556 18898185 ~ 19023658 (-)
LOC111192976 NA other downstream 887694 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other downstream 949871 18638307 ~ 18650343 (-)
llph llph other upstream 189429 19795154 ~ 19799602 (-)
ost4 NA other upstream 1939693 21545418 ~ 21574199 (-)
G65803 gen1 other upstream 2024233 21629958 ~ 21684828 (-)
G66081 bcap29 other upstream 2684960 22290685 ~ 22291682 (-)
dusp16 dusp16 other upstream 3447548 23053273 ~ 23160179 (-)

Expression


Co-expression Network