G65310


Basic Information

Item Value
gene id G65310
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 19803175 ~ 19805102 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88168
aaaggtgtaatagtgttaagggaaggtataatattgttaagggaaggtgtaatgtaaaggtgtaatagtgttgagggaaggtataatattgttaagggaaggtgtaatgttaaaggtgtaatagtgttgagggaaggtgtaatgttaaaggtgtaatagtgttgagggaaggtgtaatgtaaaggtgtaatagtgttgagggaaggtataat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88168 True 212 lncRNA 0.35 2 19803175 19805102

Neighbor

gene id symbol gene type direction distance location
golgb1 NA coding upstream 23712 19749310 ~ 19779463 (+)
orc5 orc5 coding upstream 75004 19715788 ~ 19728171 (+)
kmt2e kmt2e coding upstream 142655 19615610 ~ 19660520 (+)
LOC103040257 kdm7a coding upstream 205126 19569986 ~ 19598049 (+)
cd36 NA coding upstream 403955 19368514 ~ 19399220 (+)
ppfia2 ppfia2 coding downstream 34093 19839195 ~ 20054048 (+)
lin7a lin7a coding downstream 349953 20155055 ~ 20173304 (+)
rps16 rps16,LOC103382554 coding downstream 457478 20262580 ~ 20266197 (+)
ppp1r12a ppp1r12a coding downstream 494600 20299702 ~ 20397967 (+)
pawr LOC108434155,LOC108434154 coding downstream 612410 20417512 ~ 20497661 (+)
G65306 NA non-coding upstream 55984 19743884 ~ 19747191 (+)
G65301 NA non-coding upstream 72296 19730477 ~ 19730879 (+)
G65183 NA non-coding upstream 191303 19610912 ~ 19611872 (+)
G65182 NA non-coding upstream 192654 19609465 ~ 19610521 (+)
G65176 ndufb2,LOC107755897,LOC107694192 non-coding upstream 201537 19600888 ~ 19601638 (+)
G65404 NA non-coding downstream 346131 20151233 ~ 20151557 (+)
G65405 NA non-coding downstream 362045 20167147 ~ 20167452 (+)
G65403 NA non-coding downstream 368268 20173370 ~ 20174743 (+)
G65427 NA non-coding downstream 416998 20222100 ~ 20222899 (+)
G65435 NA non-coding downstream 428884 20233986 ~ 20234618 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other upstream 8850 19780663 ~ 19794325 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other upstream 462296 19280292 ~ 19340879 (+)
LOC103044219 mcrip1,fam195b,LOC107654575 other upstream 523658 19276802 ~ 19279517 (+)
LOC103045528 NA other upstream 525104 19223209 ~ 19278071 (+)
G64990 si:dkey-282h22.5,LOC108261121 other upstream 1179676 18556128 ~ 18623499 (+)
G65565 NA other downstream 1152033 20957135 ~ 20957635 (+)
G65575 nav3 other downstream 1219073 21024175 ~ 21024574 (+)
agbl5 NA other downstream 1635307 21440409 ~ 21549162 (+)
gen1 gen1 other downstream 1824685 21629787 ~ 21715437 (+)
ccdc167 NA other downstream 3134453 22939555 ~ 22949199 (+)

Expression


Co-expression Network