G65311


Basic Information

Item Value
gene id G65311
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 19804626 ~ 19806600 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88170
aatagtgttaagggaaggtgtaatgttaaaggtgtaatagtgttaagggaaggtgtaatagtgttaagggaaggtgtaatagtgttaagggaaggtgtaatgttaaaggtgtaatagtgttaagggaaggtataatattgttaagggaaggtgtaatgtaaaggtgtaatagttttgagggaaggtgtaatagtgttgagggaaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88170 True 207 lncRNA 0.36 2 19804626 19806600

Neighbor

gene id symbol gene type direction distance location
golgb1 NA coding upstream 25163 19749310 ~ 19779463 (+)
orc5 orc5 coding upstream 76455 19715788 ~ 19728171 (+)
kmt2e kmt2e coding upstream 144106 19615610 ~ 19660520 (+)
LOC103040257 kdm7a coding upstream 206577 19569986 ~ 19598049 (+)
cd36 NA coding upstream 405406 19368514 ~ 19399220 (+)
ppfia2 ppfia2 coding downstream 32595 19839195 ~ 20054048 (+)
lin7a lin7a coding downstream 348455 20155055 ~ 20173304 (+)
rps16 rps16,LOC103382554 coding downstream 455980 20262580 ~ 20266197 (+)
ppp1r12a ppp1r12a coding downstream 493102 20299702 ~ 20397967 (+)
pawr LOC108434155,LOC108434154 coding downstream 610912 20417512 ~ 20497661 (+)
G65306 NA non-coding upstream 57435 19743884 ~ 19747191 (+)
G65301 NA non-coding upstream 73747 19730477 ~ 19730879 (+)
G65183 NA non-coding upstream 192754 19610912 ~ 19611872 (+)
G65182 NA non-coding upstream 194105 19609465 ~ 19610521 (+)
G65176 ndufb2,LOC107755897,LOC107694192 non-coding upstream 202988 19600888 ~ 19601638 (+)
G65404 NA non-coding downstream 344633 20151233 ~ 20151557 (+)
G65405 NA non-coding downstream 360547 20167147 ~ 20167452 (+)
G65403 NA non-coding downstream 366770 20173370 ~ 20174743 (+)
G65427 NA non-coding downstream 415500 20222100 ~ 20222899 (+)
G65435 NA non-coding downstream 427386 20233986 ~ 20234618 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other upstream 10301 19780663 ~ 19794325 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other upstream 463747 19280292 ~ 19340879 (+)
LOC103044219 mcrip1,fam195b,LOC107654575 other upstream 525109 19276802 ~ 19279517 (+)
LOC103045528 NA other upstream 526555 19223209 ~ 19278071 (+)
G64990 si:dkey-282h22.5,LOC108261121 other upstream 1181127 18556128 ~ 18623499 (+)
G65565 NA other downstream 1150535 20957135 ~ 20957635 (+)
G65575 nav3 other downstream 1217575 21024175 ~ 21024574 (+)
agbl5 NA other downstream 1633809 21440409 ~ 21549162 (+)
gen1 gen1 other downstream 1823187 21629787 ~ 21715437 (+)
ccdc167 NA other downstream 3132955 22939555 ~ 22949199 (+)

Expression


Co-expression Network