G65339


Basic Information

Item Value
gene id G65339
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 19669547 ~ 19672117 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88204
ctgatagtgggtgcaggtgaattatgggagttggagtgaggtctgatagtgggtgcaggtgaattatgggagttggagtgaggtctgatagtgggtgcaggtgaattatgggagttggagtgtggtctgatagtgggtgcaggtgaattatgggagttggattgaggtctgatagtgggtgcaggtgaattatgggagttggagtgagg

Function

GO: NA

KEGG:

id description
ko04926 Relaxin signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU88204 True 209 lncRNA 0.50 2 19669547 19672117

Neighbor

gene id symbol gene type direction distance location
sema3c sema3c,LOC107680038,LOC107694195,LOC106576426 coding downstream 154164 19409298 ~ 19515383 (-)
LOC103035518 nptx1l,LOC108435874 coding downstream 548087 19111133 ~ 19121460 (-)
LOC103035404 zgc:153845,LOC103035404,LOC108435855,LOC104925609,LOC106601411 coding downstream 950917 18717502 ~ 18718630 (-)
tspan10 NA coding downstream 1079477 18586569 ~ 18590070 (-)
LOC103028209 NA coding downstream 1094378 18567677 ~ 18575169 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding upstream 60638 19732755 ~ 19738419 (-)
acss3 acss3,LOC107755903,LOC107749070 coding upstream 381834 20053951 ~ 20064790 (-)
myf5 myf5,LOC107734855 coding upstream 510977 20183094 ~ 20189701 (-)
myf6 myf6 coding upstream 529981 20202098 ~ 20205655 (-)
syt1 syt1,syt1a,LOC107694178,LOC107755909 coding upstream 850738 20522855 ~ 20810711 (-)
G65277 NA non-coding downstream 57669 19610935 ~ 19611878 (-)
G65276 NA non-coding downstream 59058 19609454 ~ 19610489 (-)
G65279 NA non-coding downstream 63046 19606290 ~ 19606501 (-)
G65273 NA non-coding downstream 76434 19592294 ~ 19593113 (-)
G65271 kdm7a,LOC106573199 non-coding downstream 81089 19580127 ~ 19588458 (-)
G65347 NA non-coding upstream 55190 19727307 ~ 19849574 (-)
G65342 NA non-coding upstream 74768 19746885 ~ 19749668 (-)
G65354 golgb1,LOC108279640 non-coding upstream 96065 19768182 ~ 19769869 (-)
G65359 LOC103037311 non-coding upstream 120666 19792783 ~ 19793144 (-)
G65363 NA non-coding upstream 132189 19804306 ~ 19805426 (-)
ndufb2 ndufb2 other downstream 63822 19600214 ~ 19605725 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 298839 19305987 ~ 19370708 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other downstream 385515 19280302 ~ 19284032 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other downstream 645889 18898185 ~ 19023658 (-)
LOC111192971 LOC108435850 other downstream 1019204 18638307 ~ 18650343 (-)
llph llph other upstream 123037 19795154 ~ 19799602 (-)
ost4 NA other upstream 1873301 21545418 ~ 21574199 (-)
G65803 gen1 other upstream 1957841 21629958 ~ 21684828 (-)
G66081 bcap29 other upstream 2618568 22290685 ~ 22291682 (-)
dusp16 dusp16 other upstream 3381156 23053273 ~ 23160179 (-)

Expression


Co-expression Network