G65407


Basic Information

Item Value
gene id G65407
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 20163283 ~ 20163492 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88296
CACACCGTTGACAGACAGGAGCTGGTCTCCTCGCTTCAGTCCACCGTGTCGCTCGGCCACGCCCCCGGGGATGATGCGGGAGATGTAGATGGGTGAGTTTTGCTCTTTCCCGCCCATCACGTTAAAGCCCAGCCCTTCGTCTGTCTTCGGCAGCTCCACCACCCGCGGGTGGGAGTGACCTTCGCTGGCCGCGAAGGCCGCCACTGTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88296 True 210 lncRNA 0.64 1 20163283 20163492

Neighbor

gene id symbol gene type direction distance location
acss3 acss3,LOC107755903,LOC107749070 coding downstream 98493 20053951 ~ 20064790 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding downstream 424864 19732755 ~ 19738419 (-)
lhfpl3 lhfpl3 coding downstream 448840 19665559 ~ 19714443 (-)
sema3c sema3c,LOC107680038,LOC107694195,LOC106576426 coding downstream 647900 19409298 ~ 19515383 (-)
LOC103035518 nptx1l,LOC108435874 coding downstream 1041823 19111133 ~ 19121460 (-)
myf5 myf5,LOC107734855 coding upstream 19602 20183094 ~ 20189701 (-)
myf6 myf6 coding upstream 38606 20202098 ~ 20205655 (-)
syt1 syt1,syt1a,LOC107694178,LOC107755909 coding upstream 359363 20522855 ~ 20810711 (-)
nav3 nav3 coding upstream 819660 20983152 ~ 21356508 (-)
LOC103044186 NA coding upstream 1210740 21374232 ~ 21386459 (-)
G65375 NA non-coding downstream 249714 19913288 ~ 19913569 (-)
G65347 NA non-coding downstream 313709 19727307 ~ 19849574 (-)
G65364 NA non-coding downstream 356682 19805520 ~ 19806601 (-)
G65363 NA non-coding downstream 357857 19804306 ~ 19805426 (-)
G65359 LOC103037311 non-coding downstream 370139 19792783 ~ 19793144 (-)
G65408 NA non-coding upstream 4142 20167634 ~ 20167986 (-)
G65409 NA non-coding upstream 7945 20171437 ~ 20174765 (-)
G65416 NA non-coding upstream 28705 20192197 ~ 20192423 (-)
G65437 NA non-coding upstream 71211 20234703 ~ 20235170 (-)
G65439 NA non-coding upstream 72769 20236261 ~ 20236525 (-)
llph llph other downstream 363681 19795154 ~ 19799602 (-)
ndufb2 ndufb2 other downstream 557558 19600214 ~ 19605725 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 792575 19305987 ~ 19370708 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other downstream 879251 19280302 ~ 19284032 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other downstream 1139625 18898185 ~ 19023658 (-)
ost4 NA other upstream 1381926 21545418 ~ 21574199 (-)
G65803 gen1 other upstream 1466466 21629958 ~ 21684828 (-)
G66081 bcap29 other upstream 2127193 22290685 ~ 22291682 (-)
dusp16 dusp16 other upstream 2889781 23053273 ~ 23160179 (-)
G66619 NA other upstream 4344342 24507834 ~ 24508281 (-)

Expression


Co-expression Network