G65408


Basic Information

Item Value
gene id G65408
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 20167634 ~ 20167986 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88297
GGGTAAGATCAGTGTTTGAGGTAAGATCGGTGGGCGGGGCTTTGTAAACGTGCCATTTGGCTGAACTATTGCTTTAAAGCAGTGAAAAGCCTCACCTACGACATGTGGTTCTGCTGAGCGTTGAggttctgctgctgttgctgctgcatcagtagctgctgctgttggcgCCGGCGGGCTGTGCGGAGCTTTTCAAAGCGAGCCTCCATCTCCTCCAGAACCTTCGGCGTGTAGCGGACCACCAGCTTCACGCTGTCCTTTGCTGCTTTCAGAAGCTCTACTGCCTTCTCATGGTGCTCCCCCTCCACACTCTGCAGCAGACAGAAAGAATGTTAAACAATTAACAGACACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88297 True 353 lncRNA 0.53 1 20167634 20167986

Neighbor

gene id symbol gene type direction distance location
acss3 acss3,LOC107755903,LOC107749070 coding downstream 102844 20053951 ~ 20064790 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding downstream 429215 19732755 ~ 19738419 (-)
lhfpl3 lhfpl3 coding downstream 453191 19665559 ~ 19714443 (-)
sema3c sema3c,LOC107680038,LOC107694195,LOC106576426 coding downstream 652251 19409298 ~ 19515383 (-)
LOC103035518 nptx1l,LOC108435874 coding downstream 1046174 19111133 ~ 19121460 (-)
myf5 myf5,LOC107734855 coding upstream 15108 20183094 ~ 20189701 (-)
myf6 myf6 coding upstream 34112 20202098 ~ 20205655 (-)
syt1 syt1,syt1a,LOC107694178,LOC107755909 coding upstream 354869 20522855 ~ 20810711 (-)
nav3 nav3 coding upstream 815166 20983152 ~ 21356508 (-)
LOC103044186 NA coding upstream 1206246 21374232 ~ 21386459 (-)
G65407 NA non-coding downstream 4142 20163283 ~ 20163492 (-)
G65375 NA non-coding downstream 254065 19913288 ~ 19913569 (-)
G65364 NA non-coding downstream 361033 19805520 ~ 19806601 (-)
G65363 NA non-coding downstream 362208 19804306 ~ 19805426 (-)
G65359 LOC103037311 non-coding downstream 374490 19792783 ~ 19793144 (-)
G65409 NA non-coding upstream 3451 20171437 ~ 20174765 (-)
G65416 NA non-coding upstream 24211 20192197 ~ 20192423 (-)
G65437 NA non-coding upstream 66717 20234703 ~ 20235170 (-)
G65439 NA non-coding upstream 68275 20236261 ~ 20236525 (-)
G65444 rps16 non-coding upstream 94671 20262657 ~ 20266198 (-)
llph llph other downstream 368032 19795154 ~ 19799602 (-)
ndufb2 ndufb2 other downstream 561909 19600214 ~ 19605725 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 796926 19305987 ~ 19370708 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other downstream 883602 19280302 ~ 19284032 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other downstream 1143976 18898185 ~ 19023658 (-)
ost4 NA other upstream 1377432 21545418 ~ 21574199 (-)
G65803 gen1 other upstream 1461972 21629958 ~ 21684828 (-)
G66081 bcap29 other upstream 2122699 22290685 ~ 22291682 (-)
dusp16 dusp16 other upstream 2885287 23053273 ~ 23160179 (-)
G66619 NA other upstream 4339848 24507834 ~ 24508281 (-)

Expression


Co-expression Network