G65676


Basic Information

Item Value
gene id G65676
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 21574051 ~ 21574272 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88668
aatttacagaaaatatatgCTTTCAAATGAGCTTTTTAATACCAGATCAGCTTCTGGAGACGCATATCGCACAGGGAACCTCGACACAGctccctctccctgtattctcctcctCAGCCTCTCATTTCTGCTGTTAAACGCTGTACGTGAGCACTGGTCTGCGTTCTAAATCACGCCCTATCACAggaatagtgcactatattgtGTGTTAACCAGTGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88668 True 222 lncRNA 0.44 1 21574051 21574272

Neighbor

gene id symbol gene type direction distance location
tmem214 tmem214,LOC104961504,LOC106608390 coding upstream 135841 21410849 ~ 21438210 (+)
LOC111192985 LOC107688027,LOC107751101,LOC107731862,LOC106606817,LOC106579815,LOC107570926 coding upstream 978750 20593666 ~ 20595301 (+)
pawr LOC108434155,LOC108434154 coding upstream 1076390 20417512 ~ 20497661 (+)
ppp1r12a ppp1r12a coding upstream 1176084 20299702 ~ 20397967 (+)
rps16 rps16,LOC103382554 coding upstream 1307854 20262580 ~ 20266197 (+)
msgn1 NA coding downstream 141180 21715452 ~ 21716948 (+)
tmem19 tmem19,LOC107719866,LOC107687559 coding downstream 330987 21905259 ~ 21911577 (+)
rab21 rab21,zgc:154045,LOC106609839,LOC107687573,LOC107690748 coding downstream 358497 21932769 ~ 21956278 (+)
ptprr ptprr coding downstream 419838 21994110 ~ 22100636 (+)
LOC103042836 NA coding downstream 530568 22104840 ~ 22161850 (+)
G65672 NA non-coding upstream 4861 21568067 ~ 21569190 (+)
G65640 NA non-coding upstream 21451 21550705 ~ 21552600 (+)
G65658 NA non-coding upstream 75192 21496539 ~ 21498859 (+)
G65654 NA non-coding upstream 87165 21481859 ~ 21486886 (+)
G65651 NA non-coding upstream 94006 21472557 ~ 21480045 (+)
G65744 NA non-coding downstream 13920 21588192 ~ 21588864 (+)
G65752 NA non-coding downstream 25217 21599489 ~ 21599843 (+)
G65759 NA non-coding downstream 40435 21614707 ~ 21615121 (+)
G65764 NA non-coding downstream 71144 21645416 ~ 21645679 (+)
G65781 NA non-coding downstream 131063 21705335 ~ 21709756 (+)
agbl5 NA other upstream 24889 21440409 ~ 21549162 (+)
G65575 nav3 other upstream 549477 21024175 ~ 21024574 (+)
G65565 NA other upstream 616416 20957135 ~ 20957635 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other upstream 1779726 19780663 ~ 19794325 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other upstream 2233172 19280292 ~ 19340879 (+)
gen1 gen1 other downstream 55515 21629787 ~ 21715437 (+)
ccdc167 NA other downstream 1365283 22939555 ~ 22949199 (+)
c7h11orf98 cunh11orf98,c19h11orf98 other downstream 1425098 22999370 ~ 23003468 (+)
crebl2 crebl2,LOC107707978 other downstream 1556808 23131080 ~ 23138011 (+)
eps8 eps8 other downstream 1648242 23222514 ~ 23323361 (+)

Expression


Co-expression Network