G65729


Basic Information

Item Value
gene id G65729
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 21557324 ~ 21560015 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88736
ctcacttacagcctttaacaaggctaggagagcgaaacccaactacatacacagtaaacacacagccaGGTCCCCAGACCTTCTCCCTCCCTACTCTATGGTGAATGCCCTAGCCGGCACCCATCTGCATAGCCCCTCCCCATAACCTAGGAAACGGGGGAGGGGCCAACTACGTAGGCTAGGGCAcacagcacacatacacacacacagacacacagaggcgggcacacagagacaggcacacacaggcatacagcagccacacacacacacacagacgccacaata
>TU88737
ctcacttacagcctttaacaaggctaggagagcgaaacccaactacatacacataaacacacagccaGGTCCCCAGACCTTCTCCCTCCCTACTCTATGGTGAATGCCCTAGCCGGCACCCATCTGCATAGCCCCTCCCCATAACCTAGGAAACGGGGGAGGGGCCAACTACGTAGGCTAGGGCAcacagcacacatacacacacacagacacacagaggcgggcacacagagacaggcacacacaggcatacagcagccacacacacacacacagacgccacaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88736 True 288 lncRNA 0.55 2 21557324 21560015
TU88737 False 287 lncRNA 0.55 2 21557324 21560015

Neighbor

gene id symbol gene type direction distance location
LOC103044186 NA coding downstream 170865 21374232 ~ 21386459 (-)
nav3 nav3 coding downstream 200816 20983152 ~ 21356508 (-)
syt1 syt1,syt1a,LOC107694178,LOC107755909 coding downstream 746613 20522855 ~ 20810711 (-)
myf6 myf6 coding downstream 1351669 20202098 ~ 20205655 (-)
myf5 myf5,LOC107734855 coding downstream 1367623 20183094 ~ 20189701 (-)
mrps10 NA coding upstream 249270 21809285 ~ 21818148 (-)
LOC103040407 NA coding upstream 263881 21823896 ~ 21877702 (-)
LOC103040999 LOC103040999 coding upstream 405962 21965977 ~ 21970642 (-)
LOC111192879 NA coding upstream 429240 21989255 ~ 21990070 (-)
cog5 cog5,LOC107583928,LOC107656447,LOC107658957 coding upstream 688872 22248887 ~ 22273098 (-)
G65724 NA non-coding downstream 6957 21549684 ~ 21550367 (-)
G65717 NA non-coding downstream 12865 21540998 ~ 21544459 (-)
G65686 NA non-coding downstream 117908 21435834 ~ 21439416 (-)
G65687 NA non-coding downstream 121635 21431812 ~ 21435689 (-)
G65684 NA non-coding downstream 146681 21410251 ~ 21410643 (-)
G65735 NA non-coding upstream 16142 21576157 ~ 21576521 (-)
G65791 NA non-coding upstream 28351 21588366 ~ 21589265 (-)
G65795 NA non-coding upstream 39474 21599489 ~ 21599699 (-)
G65799 NA non-coding upstream 52079 21612094 ~ 21612332 (-)
G65801 NA non-coding upstream 65465 21625480 ~ 21625679 (-)
llph llph other downstream 1757722 19795154 ~ 19799602 (-)
ndufb2 ndufb2 other downstream 1951599 19600214 ~ 19605725 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 2186616 19305987 ~ 19370708 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other downstream 2273292 19280302 ~ 19284032 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other downstream 2533666 18898185 ~ 19023658 (-)
G65803 gen1 other upstream 69943 21629958 ~ 21684828 (-)
G66081 bcap29 other upstream 730670 22290685 ~ 22291682 (-)
dusp16 dusp16 other upstream 1493258 23053273 ~ 23160179 (-)
G66619 NA other upstream 2947819 24507834 ~ 24508281 (-)
G66642 NA other upstream 3100009 24660024 ~ 24661902 (-)

Expression


Co-expression Network