G65831


Basic Information

Item Value
gene id G65831
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 21805312 ~ 21806045 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88857
CGCATTTCAGGTTTATTGGTTATCAACAGCATTTCCAGTAAGAAAAAAGTTACAGGTCACTCTAGTCTGACACAAAAACGAATCAAACAAGCTTTATCATGATATTCAACCTGTCATAAAAACACTTGTGTATAGTTGGACAACAGCTATGCTTTAGTAAGCACTGTGGCAAAAATGTGTATCATATATAGATAAAATGCCACTAAATCTTCATATATGAGTTAAGCGTGTACAGAATGATGAAGCAAACCTCCACAAATAGGAGAAATATACTGAAACATCAGGTGCATTAAAAAATCTGTAACAGTATTTTGTCTGAAGTGGATAAGAGGACCTTGTTACAACTCATGGCAAATTTTTGATTAAATTTTAGTACTCTGACAAAtagtaaaacattacattaaagttaaattaagtATGCTGTGTTTTGAGTTGGATTACAAAATGCTTATCCAAACAAGGTGtgtttatggcagaatgctctCTACCTACCCTCTCCAAATGTACCAAGCTTTTGGTTTTCATCCTGAAACACTAATGAGCCATAACACTAACATCACTTACAGGTGAGGTGAAAAACACTGCTGTTCATCTATATCTGCTAAATGGTAGTCATATTGGGTATATCATgatgttatacagctctggaaaaaattaagagaccacttccaAATAATCAGTTCCTcagatttatctatttatttctatattataggtacagtggcttgcaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88857 True 734 lncRNA 0.34 1 21805312 21806045

Neighbor

gene id symbol gene type direction distance location
msgn1 NA coding upstream 88364 21715452 ~ 21716948 (+)
tmem214 tmem214,LOC104961504,LOC106608390 coding upstream 367102 21410849 ~ 21438210 (+)
LOC111192985 LOC107688027,LOC107751101,LOC107731862,LOC106606817,LOC106579815,LOC107570926 coding upstream 1210011 20593666 ~ 20595301 (+)
pawr LOC108434155,LOC108434154 coding upstream 1307651 20417512 ~ 20497661 (+)
ppp1r12a ppp1r12a coding upstream 1407345 20299702 ~ 20397967 (+)
tmem19 tmem19,LOC107719866,LOC107687559 coding downstream 99214 21905259 ~ 21911577 (+)
rab21 rab21,zgc:154045,LOC106609839,LOC107687573,LOC107690748 coding downstream 126724 21932769 ~ 21956278 (+)
ptprr ptprr coding downstream 188065 21994110 ~ 22100636 (+)
LOC103042836 NA coding downstream 298795 22104840 ~ 22161850 (+)
LOC103044887 LOC103044887,LOC108435120,LOC108279510,LOC101474374,LOC100702227,LOC108233439 coding downstream 375158 22181203 ~ 22243904 (+)
G65830 NA non-coding upstream 14368 21790585 ~ 21790944 (+)
G65827 NA non-coding upstream 32565 21772453 ~ 21772747 (+)
G65781 NA non-coding upstream 95556 21705335 ~ 21709756 (+)
G65764 NA non-coding upstream 159633 21645416 ~ 21645679 (+)
G65759 NA non-coding upstream 190191 21614707 ~ 21615121 (+)
G65832 NA non-coding downstream 119 21806164 ~ 21807211 (+)
G65834 NA non-coding downstream 5001 21811046 ~ 21811619 (+)
G65838 NA non-coding downstream 9491 21815536 ~ 21818247 (+)
G65840 NA non-coding downstream 14334 21820379 ~ 21820585 (+)
G65875 NA non-coding downstream 152281 21958326 ~ 21958687 (+)
gen1 gen1 other upstream 89875 21629787 ~ 21715437 (+)
agbl5 NA other upstream 256150 21440409 ~ 21549162 (+)
G65575 nav3 other upstream 780738 21024175 ~ 21024574 (+)
G65565 NA other upstream 847677 20957135 ~ 20957635 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other upstream 2010987 19780663 ~ 19794325 (+)
ccdc167 NA other downstream 1133510 22939555 ~ 22949199 (+)
c7h11orf98 cunh11orf98,c19h11orf98 other downstream 1193325 22999370 ~ 23003468 (+)
crebl2 crebl2,LOC107707978 other downstream 1325035 23131080 ~ 23138011 (+)
eps8 eps8 other downstream 1416469 23222514 ~ 23323361 (+)
G66296 NA other downstream 1638129 23444174 ~ 23444677 (+)

Expression


Co-expression Network