G65930


Basic Information

Item Value
gene id G65930
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 21867155 ~ 21875310 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88973
TATCACTTTAGTGCATTCCTACAAGTggtaaaacatttctttaaaactgGTTATTTATTTCCCTCATTTCTCTTCCAAAACATCTAAACCTAAACACAGCAGGGGGAACTCCCCCCTAATAGAGATTAAGCTAAGCTAGCAGAACACAGGAGCTTCTGCTCTGACTCACCGGAGCTCGCTTTAAACACTTCAAATACTCACTGAAAACTGCTTCTCTTCAGGGTTTACAGCTGTATTACTGATATAAGAACAGCTTATTAGTCTTAATGTATGGCTATATTAAAAAATTTAGGGCTATTTTTGGCACGTTTAATGTGGTGTTTTGCTGCACTCTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88973 True 337 lncRNA 0.38 2 21867155 21875310

Neighbor

gene id symbol gene type direction distance location
mrps10 NA coding downstream 49007 21809285 ~ 21818148 (-)
LOC103044186 NA coding downstream 480696 21374232 ~ 21386459 (-)
nav3 nav3 coding downstream 510647 20983152 ~ 21356508 (-)
syt1 syt1,syt1a,LOC107694178,LOC107755909 coding downstream 1056444 20522855 ~ 20810711 (-)
myf6 myf6 coding downstream 1661500 20202098 ~ 20205655 (-)
LOC103040999 LOC103040999 coding upstream 90667 21965977 ~ 21970642 (-)
LOC111192879 NA coding upstream 113945 21989255 ~ 21990070 (-)
cog5 cog5,LOC107583928,LOC107656447,LOC107658957 coding upstream 373577 22248887 ~ 22273098 (-)
LOC103043373 LOC108435080,LOC108279430,LOC107729145,LOC107656392,LOC107590530,LOC107583931,LOC107708018,LOC107658953 coding upstream 429895 22305205 ~ 22352523 (-)
pde3a pde3a,LOC107707962 coding upstream 487844 22363154 ~ 22401341 (-)
G65925 NA non-coding downstream 37057 21829443 ~ 21830098 (-)
G65828 NA non-coding downstream 94415 21772445 ~ 21772740 (-)
G65806 NA non-coding downstream 137899 21661338 ~ 21729256 (-)
G65935 NA non-coding upstream 23861 21899171 ~ 21928133 (-)
G65928 tmem19,LOC107687559,LOC107758202,LOC107719866,LOC107671498 non-coding upstream 29936 21905246 ~ 21910490 (-)
G65948 rab21,zgc:154045,LOC106609839,LOC107690748,LOC107687573 non-coding upstream 57514 21932824 ~ 21956269 (-)
G65962 NA non-coding upstream 77069 21952379 ~ 21953951 (-)
G65949 NA non-coding upstream 82184 21957494 ~ 21958918 (-)
G65803 gen1 other downstream 182327 21629958 ~ 21684828 (-)
ost4 NA other downstream 292956 21545418 ~ 21574199 (-)
llph llph other downstream 2067553 19795154 ~ 19799602 (-)
ndufb2 ndufb2 other downstream 2261430 19600214 ~ 19605725 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 2496447 19305987 ~ 19370708 (-)
G66081 bcap29 other upstream 415375 22290685 ~ 22291682 (-)
dusp16 dusp16 other upstream 1177963 23053273 ~ 23160179 (-)
G66619 NA other upstream 2632524 24507834 ~ 24508281 (-)
G66642 NA other upstream 2784714 24660024 ~ 24661902 (-)
LOC103036580 slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 other upstream 3641205 25516515 ~ 25530980 (-)

Expression


Co-expression Network