G65993


Basic Information

Item Value
gene id G65993
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 22127389 ~ 22129328 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89044
AGGACATGAGGCGGACtcaattacaattatttatttaaataaacaaaactgaacaatACAAGGAAACAAGGATAACGTATAAACTAAGAAACATGGCACAAATGAACTGACGAAAAAACGTACAACACCGGATAAACATTACAGGAACAAGAGGACTATATAAAGACACggacaaacaggaaacacctgacgacaaggtaacgagggggtggagctactaCTGACACAGGTGAACACTGGTAACGTAATGACACAGACGAACACTGGGGCGGGCTACAACTGACCACAAACAAGAGcacatgggacaggaactagagAACAGACAGACGGTAAACAAACACAGGGCACatgatacagagagacagaaaacaggGACAGAGACAGGCTAGGGTGTTACAATAATTTATATGGACGGAAAGCTTAAAGTCTCGTCTGATCAAATATGTGTCAGCGGACTCTGTcggccaatcaggtggcgagtagaatatacaaaaacaacttctttactgcaaaataagttataaataag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89044 True 529 lncRNA 0.41 2 22127389 22129328

Neighbor

gene id symbol gene type direction distance location
ptprr ptprr coding upstream 26753 21994110 ~ 22100636 (+)
rab21 rab21,zgc:154045,LOC106609839,LOC107687573,LOC107690748 coding upstream 171111 21932769 ~ 21956278 (+)
tmem19 tmem19,LOC107719866,LOC107687559 coding upstream 215812 21905259 ~ 21911577 (+)
msgn1 NA coding upstream 410441 21715452 ~ 21716948 (+)
tmem214 tmem214,LOC104961504,LOC106608390 coding upstream 689179 21410849 ~ 21438210 (+)
LOC103044887 LOC103044887,LOC108435120,LOC108279510,LOC101474374,LOC100702227,LOC108233439 coding downstream 51875 22181203 ~ 22243904 (+)
dus4l dus4l coding downstream 145313 22274641 ~ 22278022 (+)
bcap29 bcap29 coding downstream 155419 22284747 ~ 22297679 (+)
LOC103025638 mansc1 coding downstream 875427 23004755 ~ 23012773 (+)
lrp6 lrp6,LOC100705426 coding downstream 891056 23020384 ~ 23085044 (+)
G65910 NA non-coding upstream 34714 22092189 ~ 22092675 (+)
G65882 NA non-coding upstream 137846 21989245 ~ 21989543 (+)
G65874 NA non-coding upstream 157312 21969509 ~ 21970077 (+)
G65873 NA non-coding upstream 164944 21959215 ~ 21962445 (+)
G65875 NA non-coding upstream 168702 21958326 ~ 21958687 (+)
G66048 NA non-coding downstream 149100 22278428 ~ 22278731 (+)
G66053 NA non-coding downstream 150420 22279748 ~ 22279994 (+)
G66055 NA non-coding downstream 151446 22280774 ~ 22281491 (+)
G66056 NA non-coding downstream 154106 22283434 ~ 22284072 (+)
G66062 NA non-coding downstream 189515 22318843 ~ 22319548 (+)
gen1 gen1 other upstream 411952 21629787 ~ 21715437 (+)
agbl5 NA other upstream 578227 21440409 ~ 21549162 (+)
G65575 nav3 other upstream 1102815 21024175 ~ 21024574 (+)
G65565 NA other upstream 1169754 20957135 ~ 20957635 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other upstream 2333064 19780663 ~ 19794325 (+)
ccdc167 NA other downstream 810227 22939555 ~ 22949199 (+)
c7h11orf98 cunh11orf98,c19h11orf98 other downstream 870042 22999370 ~ 23003468 (+)
crebl2 crebl2,LOC107707978 other downstream 1001752 23131080 ~ 23138011 (+)
eps8 eps8 other downstream 1093186 23222514 ~ 23323361 (+)
G66296 NA other downstream 1314846 23444174 ~ 23444677 (+)

Expression


Co-expression Network