G66081 (bcap29)


Basic Information

Item Value
gene id G66081
gene name bcap29
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 22290685 ~ 22291682 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89155
ctAGTTTCACTGAAAAAGCTACAGAAAGAGTAACTGTGTAGTATTCTTGCCAAATAGTTAAGTCAACAGTTTGATTTTGAGGAATACATTTCCACCGAACCCTAGTCGTTTATACTTAGACAACACCAGAGGCTTTTGTATGACAAgccttttaaaagtgtttgtccATGAAAGAGACAACcttattatattgttttctgCTAATTCCATCATCACCAAGTCTGAAAGCACAGTGAAAGTTTAGCCTGGTTTGGTAACAATtttgaaaaatacagaaaaaaagacctGCTTGAGCAATTCAATGTCCTCCATGTACTTTTTGGCAGCCAGGTTAGCTGCCTCTGTCTGGGCATGAAGAGCTTTGCTGGTGTCTGTAACCTCTGCCAGCTGATTTATCAGCATGATCACCCGGCGCAAGACCAGCCACAAGAAGAGGGAGAAGCCAGAGATATAGAGATTCCTCTGGGCTCTGAAAAGCTTCATATGCAAGTGGTCAACCATGTTAGGTGTCATTTTGGCTTCTTTGCTGGGTTCAGCTCCAGAGTATTTTCTAACCTCCCTTACAGCAtccagaaaaagaacaataaggatGATTATCATTGCCAGGAATCCCTTGTTCCAGAATCGAGCAATGCTGCTCCACATGTTCAGTTTGAATATAGATTGCCATCTGCACAGAACAGcaggacacaaaaaaacatatttgagaATGTGATGGAG

Function

symbol description
bcap29 Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and protein localization to endoplasmic reticulum exit site. Predicted to act upstream of or within intracellular protein transport and vesicle-mediated transport. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human BCAP29 (B cell receptor associated protein 29).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89155 True 720 TUCP 0.41 3 22290685 22291682

Neighbor

gene id symbol gene type direction distance location
cog5 cog5,LOC107583928,LOC107656447,LOC107658957 coding downstream 17587 22248887 ~ 22273098 (-)
LOC111192879 NA coding downstream 300615 21989255 ~ 21990070 (-)
LOC103040999 LOC103040999 coding downstream 320043 21965977 ~ 21970642 (-)
LOC103040407 NA coding downstream 412983 21823896 ~ 21877702 (-)
mrps10 NA coding downstream 472537 21809285 ~ 21818148 (-)
LOC103043373 LOC108435080,LOC108279430,LOC107729145,LOC107656392,LOC107590530,LOC107583931,LOC107708018,LOC107658953 coding upstream 13523 22305205 ~ 22352523 (-)
pde3a pde3a,LOC107707962 coding upstream 71472 22363154 ~ 22401341 (-)
ada2 cecr1,LOC108442796 coding upstream 619505 22911187 ~ 22930186 (-)
LOC103026244 atp6v1e1b,atp6v1e1,LOC103026244,LOC108442797,LOC107658907,LOC107583987,LOC100708725 coding upstream 638540 22930222 ~ 22937099 (-)
LOC103031542 LOC103031542,LOC108443062,LOC108279885 coding upstream 657815 22949497 ~ 22991675 (-)
G66052 NA non-coding downstream 11271 22279097 ~ 22279414 (-)
G66022 NA non-coding downstream 128285 22161671 ~ 22162400 (-)
G66004 NA non-coding downstream 159092 22131088 ~ 22131593 (-)
G65963 NA non-coding downstream 324989 21964958 ~ 21965696 (-)
G65950 NA non-coding downstream 329579 21959297 ~ 21961106 (-)
G66080 bcap29 non-coding upstream 1415 22293097 ~ 22298282 (-)
G66074 NA non-coding upstream 7799 22299481 ~ 22361569 (-)
G66084 NA non-coding upstream 19785 22311467 ~ 22313798 (-)
G66085 NA non-coding upstream 28499 22320181 ~ 22321222 (-)
G66113 NA non-coding upstream 115857 22407539 ~ 22407750 (-)
G65803 gen1 other downstream 605857 21629958 ~ 21684828 (-)
ost4 NA other downstream 716486 21545418 ~ 21574199 (-)
llph llph other downstream 2491083 19795154 ~ 19799602 (-)
ndufb2 ndufb2 other downstream 2684960 19600214 ~ 19605725 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other downstream 2919977 19305987 ~ 19370708 (-)
dusp16 dusp16 other upstream 761591 23053273 ~ 23160179 (-)
G66619 NA other upstream 2216152 24507834 ~ 24508281 (-)
G66642 NA other upstream 2368342 24660024 ~ 24661902 (-)
LOC103036580 slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 other upstream 3224833 25516515 ~ 25530980 (-)
tmem258 NA other upstream 5741019 28032701 ~ 28035961 (-)

Expression


Co-expression Network