G66143


Basic Information

Item Value
gene id G66143
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 22963871 ~ 22969303 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89218
CCTTCAGTAGACAAGGTCAGTACAGAGAGGGGAAAGAAGGTAAATGAGATGACGAGAAGAGGTGAGAGAAAATGCAAAAgcatctttacacacacacacatacacacacacaccccagagGGCATGTCCTGTACCTGATGCAAACAGGTCTAGACTGGGGGCAGTGTCTGATATAGGGATGACTGGTTCTGACACGGAATTACAAAAAtctagagacaaaaaaaaaacataaccacAGACAGCACAGACTCATACACACAGCggatacatgaaaaaaacatcaaacccACCACATGCAAATGATCCTAAACaaaaaagcacttcagtttacaTCAATTAAGCTATGGTAATCCACACAAAACATGCCAACACACCAAACCACCTCTGTGAAACAAGTGCAATACAGTGACTCATATGTAGAAAATAAACTATGTGCATCATTCTCACATAGATGATTCATATTTGCCTCTCTGCTAGAGAGGCTACATCGAAAATATTTGTAATGTCTTCTTTAATCACAAGGTGGCCCAGCTGAGCAGGACATACAGTAAATGTAGCCATAATTAAGTGTTACATTTCTTGTGCACTTAATGTTTCCATGCAGTTTACTTATTTTggcagtttttgttttaaatgatgtCTCTCTTAAATCTACACTGTTGAATTAAACTGATCATGTTACTATTTCTTTAAGACCTTTATGGGATATAGAAATGAACTCTTATGAACAGCTGAAACTGCTGAAGGCTGAATGGATTAATGTATGtaaatgcattgtttttgtaacatcACAAACATCAAAAATAGGCTGTATATGCAGCTTGGGTTCACATATGAACTGTATTAACTCTGTATTAACTTTTgcttctcttgttttgtttttttgtcaccCTTTAAATGACGCATGTTTCAATAATGGGCACTCAGCAAGCATTTACCACCAAACAGATCTGTTGTGAGGGCTACAGAGCTTGAGTTGATAGGGTTGTTAGCAGTAAGTGGGGTCTGAGTGGCGGGGGGCACCACTGAGCTGAAGCAGGAGGTACTGCTCTCTACAGGCTGCATGGAGAACAGGTCCAGCTGTGGGGAAACTGCTGACTGTCCTGGAGATGGGGCAAAGGGGTCTTAACAGGAGAGAAAAGTTTAGCCATTTCTGTGAAGGAAACCTCTCTACTGACCTCCAAGGAGATCCGCTGAGCCGGAGGTGGAGCCGGCAGCGGTAGTGGGAGGAGCTAAAGAGATGGCTGCCTCACCGGTTGTGGCGCTAGGTGCGGCTGTCGCAGGACAGGTGGAGTCTACAGCGGGAGAGGGGTCGGGAAGGAGAGTCTCCGTGGTGAGGGAACCGAATTCTACATAAGCCATGACCCCGAAACAGAAGCATACATTGACAGACAACAGAACACAAAGGcaaaacagaggacaggagcacaTTTAagggagaaagaagagagagagattcgaTCTAAGACAAGATTAGAAAGAAATGTTAAAGGAAATCTACTGGCTTGATTTATAATGCAGTCTCTCAGCTTTGCATCCAGCAACATTATCAACCCTTAGAAGTCACAGTTTTTgccaaaaataacaaaagtttgcaattagctaattagccattgcaattacattttaatttatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89218 True 1637 lncRNA 0.42 2 22963871 22969303

Neighbor

gene id symbol gene type direction distance location
bcap29 bcap29 coding upstream 666192 22284747 ~ 22297679 (+)
dus4l dus4l coding upstream 685849 22274641 ~ 22278022 (+)
LOC103044887 LOC103044887,LOC108435120,LOC108279510,LOC101474374,LOC100702227,LOC108233439 coding upstream 719967 22181203 ~ 22243904 (+)
LOC103042836 NA coding upstream 802021 22104840 ~ 22161850 (+)
ptprr ptprr coding upstream 863235 21994110 ~ 22100636 (+)
LOC103025638 mansc1 coding downstream 35452 23004755 ~ 23012773 (+)
lrp6 lrp6,LOC100705426 coding downstream 51081 23020384 ~ 23085044 (+)
rerg rerg,LOC107662225,LOC107669035 coding downstream 482260 23451563 ~ 23548257 (+)
etv6 etv6 coding downstream 947003 23916306 ~ 23953720 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding downstream 1057158 24026461 ~ 24117713 (+)
G66144 NA non-coding upstream 1029 22958441 ~ 22962842 (+)
G66140 NA non-coding upstream 8437 22954277 ~ 22955434 (+)
G66062 NA non-coding upstream 644323 22318843 ~ 22319548 (+)
G66056 NA non-coding upstream 679799 22283434 ~ 22284072 (+)
G66055 NA non-coding upstream 682380 22280774 ~ 22281491 (+)
G66183 NA non-coding downstream 138583 23107886 ~ 23204707 (+)
G66201 NA non-coding downstream 215054 23184357 ~ 23189666 (+)
G66207 NA non-coding downstream 256727 23226030 ~ 23226867 (+)
G66210 NA non-coding downstream 356964 23326267 ~ 23424924 (+)
G66223 NA non-coding downstream 426443 23395746 ~ 23396291 (+)
ccdc167 NA other upstream 14672 22939555 ~ 22949199 (+)
gen1 gen1 other upstream 1248434 21629787 ~ 21715437 (+)
agbl5 NA other upstream 1414709 21440409 ~ 21549162 (+)
G65575 nav3 other upstream 1939297 21024175 ~ 21024574 (+)
G65565 NA other upstream 2006236 20957135 ~ 20957635 (+)
c7h11orf98 cunh11orf98,c19h11orf98 other downstream 30067 22999370 ~ 23003468 (+)
crebl2 crebl2,LOC107707978 other downstream 161777 23131080 ~ 23138011 (+)
eps8 eps8 other downstream 253211 23222514 ~ 23323361 (+)
G66296 NA other downstream 474871 23444174 ~ 23444677 (+)
G66303 NA other downstream 514030 23483333 ~ 23483933 (+)

Expression


Co-expression Network