c7h11orf98 (cunh11orf98,c19h11orf98)


Basic Information

Item Value
gene id c7h11orf98
gene name cunh11orf98,c19h11orf98
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 22999370 ~ 23003468 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89229
TATATATTGACTAATGGTTGTATACTGTTGTTGTGCATGTAAATTTGAGATGATAGATTGATGGAAGCAGGACCGGATAACCCATGGGATAATTCTGTACTCTGGCTGGACTAGAGGTGGATAACCCAGGTCCCGAATTAAAAACCCATCCTAGTTTTGAACCAACAGTCTGGGCGGCTCAGCCACATATTAGCCATACACCAAACCGCCCAGGCAGCTGGTACTGgaatggatttttattttttggacctgggttacccacctctCATCTGCACTACAGCAGCCCGCTGCAGCtctgccctctagtggtaaAGATAGAAAACTATACAAATAGAAAagcttaaaatcttaaaacgCTGATTTTGGTCCCATAATTTAAGGATACCAAAATATGCGGATTTAAAGATCAATAGATCAAAATATTAGGccagaataacattttaaatcacatttaattaaataaattaaaccttttaatttacatttgtatattgtatatttttcattttgatttttAAAGATTAAGAATACCATTAATAATATAGCGGCAGTGTCTTTAAACAAATATCTATACACCAATAATTACACACTTGTTCGACACAATTTACTCGGGTTATTTtcttaaatgatttttatttagacttttattgtatattgtgtGAACCGGAAGTCATATTTAACAGGCTCCTCACGTTGTAGTAAGCATGGCTCCAGGTGGAAAAATCAACAAGCCTAAAACAGAATTGGGGAAAAATCTCTTCAAGAGGAGGAGAGTTCTGACAAagcagaggaggaagaaacatTGCATTATTGGGGCAGTGGTGGACGAAGGCCTTATAACAAAACACCACCTGAAAAAAAGAAGCACTAGTTCTAGGGCAAACATCACCTTGtctgggaagaaaaaaaacaagttactCAAGCAGCTGCGCCACATGGAGAAAGAAAAGTCAAGCATGCAAGtTGAAACCGTTTCAGTGAAGAAagctcctgctcctgctgctaaGAAAACTTCTACTGCCAGACAGCAAACAAAAAATCCCTCCTCATCCGCTGTTGTTGAAATGATGGATGTGCAATAAATGAACAATTTTTTGGAGTTCACTGCAACTGTGCTTGACCAAAGGGACTGACAAATATTCACTAGTTATGGTGCAAGCTGTTGGTCTTCAGATGTGCACATCAGCTGAATACTACTGTTACTTGCTACTATAATGCAAGTCTTTCTGGTTAATAAGCCTTTGTGGATGCCTGTGCCTGTGTGTTAGGGATCcataaagaatattttttattgttgtttctgCTGCCCTTTTTATAATAGTCCAGATATCTGCTTTATAACTGCACT
>XM_007256034.3
ttatttagacttttattgtatattgtgtGAACCGGAAGTCATATTTAACAGGCTCCTCACGTTGTAGTAAGCATGGCTCCAGGTGGAAAAATCAACAAGCCTAAAACAGAATTGGGGAAAAATCTCTTCAAGAGGAGGAGAGTTCTGACAAagcagaggaggaagaaacatTGCATTATTGGGGCAGTGGTGGACGAAGGCCTTATAACAAAACACCACCTGAAAAAAAGAAGCACTAGTTCTAGGGCAAACATCACCTTGtctgggaagaaaaaaaacaagttactCAAGCAGCTGCGCCACATGGAGAAAGAAAAGTCAAGCATGCAAGtTGAAACCGTTTCAGTGAAGAAagctcctgctcctgctgctaaGAAAACTTCTACTGCCAGACAGCAAACAAAAAATCCCTCCTCATCCGCTGTTGTTGAAATGATGGATGTGCAATAAATGAACAATTTTTTGGAGTTCACTGCAACTGTGCTTGACCAAAGGGACTGACAAATATTCACTAGTTATGGTGCAAGCTGTTGGTCTTCAGATGTGCACATCAGCTGAATACTACTGTTACTTGCTACTATAATGCAAGTCTTTCTGGTTAATAAGCCTTTGTGGATGCCTGTGCCTGTGTGTTAGGGATCcataaagaatattttttattgttgtttctgCTGCCCTTTTTATAATAGTCCAGATATCTGCTTTATAACTGCACTCAGTACAATATAtgcataataaaaacatatgatTGCAGATACAAATA

Function

NR:

description
uncharacterized protein C11orf98 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89229 True 1348 TUCP 0.38 4 22999370 23003421
XM_007256034.3 False 763 mRNA 0.39 4 23000002 23003468

Neighbor

gene id symbol gene type direction distance location
bcap29 bcap29 coding upstream 701691 22284747 ~ 22297679 (+)
dus4l dus4l coding upstream 721348 22274641 ~ 22278022 (+)
LOC103044887 LOC103044887,LOC108435120,LOC108279510,LOC101474374,LOC100702227,LOC108233439 coding upstream 755466 22181203 ~ 22243904 (+)
LOC103042836 NA coding upstream 837520 22104840 ~ 22161850 (+)
ptprr ptprr coding upstream 898734 21994110 ~ 22100636 (+)
LOC103025638 mansc1 coding downstream 1287 23004755 ~ 23012773 (+)
lrp6 lrp6,LOC100705426 coding downstream 16916 23020384 ~ 23085044 (+)
rerg rerg,LOC107662225,LOC107669035 coding downstream 448095 23451563 ~ 23548257 (+)
etv6 etv6 coding downstream 912838 23916306 ~ 23953720 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding downstream 1022993 24026461 ~ 24117713 (+)
G66143 NA non-coding upstream 30067 22963871 ~ 22969303 (+)
G66144 NA non-coding upstream 36528 22958441 ~ 22962842 (+)
G66140 NA non-coding upstream 43936 22954277 ~ 22955434 (+)
G66062 NA non-coding upstream 679822 22318843 ~ 22319548 (+)
G66056 NA non-coding upstream 715298 22283434 ~ 22284072 (+)
G66183 NA non-coding downstream 104418 23107886 ~ 23204707 (+)
G66201 NA non-coding downstream 180889 23184357 ~ 23189666 (+)
G66207 NA non-coding downstream 222562 23226030 ~ 23226867 (+)
G66210 NA non-coding downstream 322799 23326267 ~ 23424924 (+)
G66223 NA non-coding downstream 392278 23395746 ~ 23396291 (+)
ccdc167 NA other upstream 50171 22939555 ~ 22949199 (+)
gen1 gen1 other upstream 1283933 21629787 ~ 21715437 (+)
agbl5 NA other upstream 1450208 21440409 ~ 21549162 (+)
G65575 nav3 other upstream 1974796 21024175 ~ 21024574 (+)
G65565 NA other upstream 2041735 20957135 ~ 20957635 (+)
crebl2 crebl2,LOC107707978 other downstream 127612 23131080 ~ 23138011 (+)
eps8 eps8 other downstream 219046 23222514 ~ 23323361 (+)
G66296 NA other downstream 440706 23444174 ~ 23444677 (+)
G66303 NA other downstream 479865 23483333 ~ 23483933 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other downstream 694684 23698152 ~ 23720094 (+)

Expression


Co-expression Network