G66207


Basic Information

Item Value
gene id G66207
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 23226030 ~ 23226867 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89345
atcgttttttttttggtgactgATATGTAAATtaactgttctgattggctcccCCAAATGGTGGCTCAGCTTCTATGATGTGAacgctttacaaattagaattCTCAAGACACCTTCAGATTGAAGGCCCAACTTCTTTTCACGCTGCAATGCCACCAGTTTTGCTTTCAGTGGGTAATCCGCGCCCAGGAGGAATCCGTGGAAGACAAACAGCCAGAGCAGTCTCAGATCGGTGACAAAGAaccacccaccaccaccaccagcagcatcACCATGTGGATGCCGAGCTCAGTGAAACTTAAACCACAAGAGCACAGCTGTATGAAAGCATGTCTCTTTAGGGAGTTCAGTTTCCATGTGAAATCTGTTTTTGGCCGCAGTCCCGGTATTCTGCAGGAGTATTTTTGGTCGTTCCCAGCCTTATTGTTGACAAACAAAATGTCCTTCAGAGCCCTCGTCACTGCCACTGTAACACAGATCTGCTGGATGTAGAAGGAGGTGGAGTTGAACTGAATGCTCTGAAGGATTCTGTCTCTTATGCCTTCTGGCACCCTACATGCGGGTGGGAATTATGAAAAGTGACAATTAGAACTTGGTGATGGGCCCCAAACATCTTGTCACAATAAACTTTTCAGTGTAGACCATGTTAGTATCagagaatttaatttaatttttataaaaagatatatagtaatatgtaaatattattaaagttGAAAACTATTTACTCTCCagttcagaaaaaaagtatgtgaacccctaggtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89345 True 766 lncRNA 0.42 2 23226030 23226867

Neighbor

gene id symbol gene type direction distance location
lrp6 lrp6,LOC100705426 coding upstream 140986 23020384 ~ 23085044 (+)
LOC103025638 mansc1 coding upstream 213257 23004755 ~ 23012773 (+)
bcap29 bcap29 coding upstream 928351 22284747 ~ 22297679 (+)
dus4l dus4l coding upstream 948008 22274641 ~ 22278022 (+)
LOC103044887 LOC103044887,LOC108435120,LOC108279510,LOC101474374,LOC100702227,LOC108233439 coding upstream 982126 22181203 ~ 22243904 (+)
rerg rerg,LOC107662225,LOC107669035 coding downstream 224696 23451563 ~ 23548257 (+)
etv6 etv6 coding downstream 689439 23916306 ~ 23953720 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding downstream 799594 24026461 ~ 24117713 (+)
lrig3 lrig3,LOC104942525 coding downstream 1070050 24296917 ~ 24320066 (+)
LOC111192915 NA coding downstream 1232536 24459403 ~ 24461001 (+)
G66183 NA non-coding upstream 21323 23107886 ~ 23204707 (+)
G66201 NA non-coding upstream 36364 23184357 ~ 23189666 (+)
G66143 NA non-coding upstream 256727 22963871 ~ 22969303 (+)
G66144 NA non-coding upstream 263188 22958441 ~ 22962842 (+)
G66140 NA non-coding upstream 270596 22954277 ~ 22955434 (+)
G66210 NA non-coding downstream 99400 23326267 ~ 23424924 (+)
G66223 NA non-coding downstream 168879 23395746 ~ 23396291 (+)
LOC111193001 NA non-coding downstream 169616 23396483 ~ 23400422 (+)
G66305 NA non-coding downstream 282108 23508975 ~ 23509533 (+)
G66334 NA non-coding downstream 347236 23574103 ~ 23574333 (+)
crebl2 crebl2,LOC107707978 other upstream 88019 23131080 ~ 23138011 (+)
c7h11orf98 cunh11orf98,c19h11orf98 other upstream 222562 22999370 ~ 23003468 (+)
ccdc167 NA other upstream 276831 22939555 ~ 22949199 (+)
gen1 gen1 other upstream 1510593 21629787 ~ 21715437 (+)
agbl5 NA other upstream 1676868 21440409 ~ 21549162 (+)
G66296 NA other downstream 217307 23444174 ~ 23444677 (+)
G66303 NA other downstream 256466 23483333 ~ 23483933 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other downstream 471285 23698152 ~ 23720094 (+)
rpap3 rpap3 other downstream 1140625 24367492 ~ 24383022 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 1291755 24518622 ~ 24552340 (+)

Expression


Co-expression Network