G66305


Basic Information

Item Value
gene id G66305
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 23508975 ~ 23509533 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89476
GATTGCTTCACTGTGTAGCACCTGTTTGGCTGCCTATACCCTCTCCCTTCTCCCTGCTGctgcctgcctgcctgcatgCCATTGCCCTTTCCCTCTGCCTGCCTGCTACTTACCTGCTTGTGGCCTACTTACCTCCATCTTCAACATCTTCATTCATCTGGACCAAGTTGAAGCTGAAGT
>TU89477
GATTGCTTCACTGTGTAGCACCTGTTTGGCTGCCTATACCCTCTCCCTTCTCCCTGCTGctgcctgcctgcctgcatgCCATTGCCCTTTCCCTCTGCCTGCCTGCTACTTACCTGCTTGTGGCCTACTTACCTCCATCTTCAACATCTTCATTCATCTGGACCAAGGTATGAACAACAGCTGTACACAGTGTTTAAAGATAAGCGCGTGACAACCACTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89476 False 180 lncRNA 0.53 3 23508975 23509533
TU89477 True 222 lncRNA 0.50 2 23508975 23509239

Neighbor

gene id symbol gene type direction distance location
lrp6 lrp6,LOC100705426 coding upstream 423931 23020384 ~ 23085044 (+)
LOC103025638 mansc1 coding upstream 496202 23004755 ~ 23012773 (+)
bcap29 bcap29 coding upstream 1211296 22284747 ~ 22297679 (+)
dus4l dus4l coding upstream 1230953 22274641 ~ 22278022 (+)
LOC103044887 LOC103044887,LOC108435120,LOC108279510,LOC101474374,LOC100702227,LOC108233439 coding upstream 1265071 22181203 ~ 22243904 (+)
etv6 etv6 coding downstream 406773 23916306 ~ 23953720 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding downstream 516928 24026461 ~ 24117713 (+)
lrig3 lrig3,LOC104942525 coding downstream 787384 24296917 ~ 24320066 (+)
LOC111192915 NA coding downstream 949870 24459403 ~ 24461001 (+)
LOC103034593 LOC108442311 coding downstream 1000956 24510489 ~ 24517356 (+)
G66210 NA non-coding upstream 84051 23326267 ~ 23424924 (+)
LOC111193001 NA non-coding upstream 108553 23396483 ~ 23400422 (+)
G66223 NA non-coding upstream 112684 23395746 ~ 23396291 (+)
G66207 NA non-coding upstream 282108 23226030 ~ 23226867 (+)
G66183 NA non-coding upstream 304268 23107886 ~ 23204707 (+)
G66334 NA non-coding downstream 64570 23574103 ~ 23574333 (+)
LOC111192880 NA non-coding downstream 84695 23594228 ~ 23599591 (+)
G66338 NA non-coding downstream 85328 23594861 ~ 23595114 (+)
G66353 NA non-coding downstream 308540 23818073 ~ 23820977 (+)
G66382 NA non-coding downstream 402295 23911828 ~ 23912211 (+)
G66303 NA other upstream 25042 23483333 ~ 23483933 (+)
G66296 NA other upstream 64298 23444174 ~ 23444677 (+)
eps8 eps8 other upstream 185614 23222514 ~ 23323361 (+)
crebl2 crebl2,LOC107707978 other upstream 370964 23131080 ~ 23138011 (+)
c7h11orf98 cunh11orf98,c19h11orf98 other upstream 505507 22999370 ~ 23003468 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other downstream 188619 23698152 ~ 23720094 (+)
rpap3 rpap3 other downstream 857959 24367492 ~ 24383022 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 1009089 24518622 ~ 24552340 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other downstream 1089633 24599166 ~ 24684580 (+)
cspg4 cspg4 other downstream 1679652 25189185 ~ 25300875 (+)

Expression


Co-expression Network