G66338


Basic Information

Item Value
gene id G66338
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 23594861 ~ 23595114 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89510
aaattgaagatttattttttgggccatatcgcccagctctactgcATATGTTTTACACTGAGAAATTCTGTGAAATGTcagagctaacagtgctaacccttcagagctaacagtgctaacgctaactagctgtaGCTGTAACAAACAACAGCAGGCACAGGAGCAGGGGAAAAACACATGTAGGCACACAAACACTTATTTAGAGCAGTACTTTGTATAATTAACACTTCTTGAGTGTTTTAGAACTatttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89510 True 254 lncRNA 0.38 1 23594861 23595114

Neighbor

gene id symbol gene type direction distance location
rerg rerg,LOC107662225,LOC107669035 coding upstream 46604 23451563 ~ 23548257 (+)
lrp6 lrp6,LOC100705426 coding upstream 509817 23020384 ~ 23085044 (+)
LOC103025638 mansc1 coding upstream 582088 23004755 ~ 23012773 (+)
bcap29 bcap29 coding upstream 1297182 22284747 ~ 22297679 (+)
dus4l dus4l coding upstream 1316839 22274641 ~ 22278022 (+)
etv6 etv6 coding downstream 321192 23916306 ~ 23953720 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding downstream 431347 24026461 ~ 24117713 (+)
lrig3 lrig3,LOC104942525 coding downstream 701803 24296917 ~ 24320066 (+)
LOC111192915 NA coding downstream 864289 24459403 ~ 24461001 (+)
LOC103034593 LOC108442311 coding downstream 915375 24510489 ~ 24517356 (+)
G66334 NA non-coding upstream 20528 23574103 ~ 23574333 (+)
G66305 NA non-coding upstream 85328 23508975 ~ 23509533 (+)
G66210 NA non-coding upstream 169937 23326267 ~ 23424924 (+)
G66353 NA non-coding downstream 222959 23818073 ~ 23820977 (+)
G66382 NA non-coding downstream 316714 23911828 ~ 23912211 (+)
G66389 NA non-coding downstream 381126 23976240 ~ 23977946 (+)
G66472 NA non-coding downstream 542791 24137905 ~ 24138185 (+)
G66476 NA non-coding downstream 591020 24186134 ~ 24186383 (+)
G66303 NA other upstream 110928 23483333 ~ 23483933 (+)
G66296 NA other upstream 150184 23444174 ~ 23444677 (+)
eps8 eps8 other upstream 271500 23222514 ~ 23323361 (+)
crebl2 crebl2,LOC107707978 other upstream 456850 23131080 ~ 23138011 (+)
c7h11orf98 cunh11orf98,c19h11orf98 other upstream 591393 22999370 ~ 23003468 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other downstream 103038 23698152 ~ 23720094 (+)
rpap3 rpap3 other downstream 772378 24367492 ~ 24383022 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 923508 24518622 ~ 24552340 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other downstream 1004052 24599166 ~ 24684580 (+)
cspg4 cspg4 other downstream 1594071 25189185 ~ 25300875 (+)

Expression


Co-expression Network