G66382


Basic Information

Item Value
gene id G66382
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 23911828 ~ 23912211 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89572
GACTTCCCGGAAGTATTCGACCCCCCACCCACCTGGATTCTTcacttaatacaaaataatTCCAGGTTGCTTGTTCACAACGTCACAGGAAATGAAAGAAATTATGATGGATGACTGACTGACAGGCAGAGACAGAACCTATGATGCACCccctctcaaagtctgtcaactgagGAAAAAAGTTTTTGAATGTGTTGTAAAGGCATGTCTAGCAATCAacagtctctcaccaagaggtacactacccaaaagtagcttCTGAGGACCTCTTGTATGCCcatttactgtaaaatgaatCAGGGATGACTGAAGCCCCATCCATATATGAAGTAGAACTCTTGTCAGCATGAACAagagtataca

Function

GO:

id name namespace
GO:0030203 glycosaminoglycan metabolic process biological_process
GO:0006023 aminoglycan biosynthetic process biological_process
GO:0006024 glycosaminoglycan biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89572 True 363 lncRNA 0.42 2 23911828 23912211

Neighbor

gene id symbol gene type direction distance location
rerg rerg,LOC107662225,LOC107669035 coding upstream 363571 23451563 ~ 23548257 (+)
lrp6 lrp6,LOC100705426 coding upstream 826784 23020384 ~ 23085044 (+)
LOC103025638 mansc1 coding upstream 899055 23004755 ~ 23012773 (+)
bcap29 bcap29 coding upstream 1614149 22284747 ~ 22297679 (+)
dus4l dus4l coding upstream 1633806 22274641 ~ 22278022 (+)
etv6 etv6 coding downstream 4095 23916306 ~ 23953720 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding downstream 114250 24026461 ~ 24117713 (+)
lrig3 lrig3,LOC104942525 coding downstream 384706 24296917 ~ 24320066 (+)
LOC111192915 NA coding downstream 547192 24459403 ~ 24461001 (+)
LOC103034593 LOC108442311 coding downstream 598278 24510489 ~ 24517356 (+)
G66353 NA non-coding upstream 90851 23818073 ~ 23820977 (+)
LOC111192880 NA non-coding upstream 312237 23594228 ~ 23599591 (+)
G66338 NA non-coding upstream 316714 23594861 ~ 23595114 (+)
G66334 NA non-coding upstream 337495 23574103 ~ 23574333 (+)
G66305 NA non-coding upstream 402295 23508975 ~ 23509533 (+)
G66389 NA non-coding downstream 64029 23976240 ~ 23977946 (+)
G66472 NA non-coding downstream 225694 24137905 ~ 24138185 (+)
G66476 NA non-coding downstream 273923 24186134 ~ 24186383 (+)
G66480 slc16a7 non-coding downstream 310794 24223005 ~ 24231186 (+)
G66488 NA non-coding downstream 411599 24323810 ~ 24324032 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other upstream 191734 23698152 ~ 23720094 (+)
G66303 NA other upstream 427895 23483333 ~ 23483933 (+)
G66296 NA other upstream 467151 23444174 ~ 23444677 (+)
eps8 eps8 other upstream 588467 23222514 ~ 23323361 (+)
crebl2 crebl2,LOC107707978 other upstream 773817 23131080 ~ 23138011 (+)
rpap3 rpap3 other downstream 455281 24367492 ~ 24383022 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 606411 24518622 ~ 24552340 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other downstream 686955 24599166 ~ 24684580 (+)
cspg4 cspg4 other downstream 1276974 25189185 ~ 25300875 (+)
LOC111192916 NA other downstream 2168241 26080452 ~ 26092119 (+)

Expression


Co-expression Network