G66416


Basic Information

Item Value
gene id G66416
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 23698158 ~ 23698427 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89614
CCGATGTCGGAGTTGCAGTAGGCGTCCTGCGGGTGCGCGGGCGCGCACGAGCACGCCCTCCGTCAGCAGGTCCTCCCGCAGactgcacagcagcagcagcgcgctCAGCACCTGGTAGCGAGGCTTCATGATGGAGGAGTTACTCAGAACTGTgcgggtctctctctcgaggctgagtctctctctgactgagtgtgagtgtgtgagtgtgtgtgagagtatatataagggtgtgtgtgtctccTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89614 True 246 lncRNA 0.60 2 23698158 23698427

Neighbor

gene id symbol gene type direction distance location
ptpro ptpro coding downstream 264208 23326255 ~ 23433950 (-)
tbk1 tbk1,LOC107568716,LOC107710078 coding downstream 513219 23163543 ~ 23184939 (-)
gpr19 gpr19,LOC107707975,LOC107658992,LOC107710070,LOC107662212 coding downstream 544184 23139269 ~ 23153974 (-)
LOC103031542 LOC103031542,LOC108443062,LOC108279885 coding downstream 706483 22949497 ~ 22991675 (-)
LOC103026244 atp6v1e1b,atp6v1e1,LOC103026244,LOC108442797,LOC107658907,LOC107583987,LOC100708725 coding downstream 761059 22930222 ~ 22937099 (-)
LOC103027854 NA coding upstream 133276 23831703 ~ 23846911 (-)
LOC107197793 NA coding upstream 152463 23850890 ~ 23866931 (-)
LOC103028371 NA coding upstream 174246 23872673 ~ 23886786 (-)
LOC103047861 LOC107575455 coding upstream 195135 23893562 ~ 23906954 (-)
LOC103022521 NA coding upstream 263547 23961974 ~ 23992813 (-)
G66414 NA non-coding downstream 34189 23602466 ~ 23663969 (-)
G66312 NA non-coding downstream 181575 23508983 ~ 23516583 (-)
G66300 NA non-coding downstream 248372 23449400 ~ 23449786 (-)
G66297 NA non-coding downstream 253511 23444237 ~ 23444647 (-)
G66288 NA non-coding downstream 298659 23398426 ~ 23399499 (-)
G66438 NA non-coding upstream 213364 23911791 ~ 23912473 (-)
G66496 NA non-coding upstream 592161 24290588 ~ 24290790 (-)
G66509 NA non-coding upstream 654874 24353301 ~ 24353703 (-)
G66600 NA non-coding upstream 669686 24368113 ~ 24368356 (-)
G66601 rpap3 non-coding upstream 670011 24368438 ~ 24373280 (-)
dusp16 dusp16 other downstream 537979 23053273 ~ 23160179 (-)
G66081 bcap29 other downstream 1406476 22290685 ~ 22291682 (-)
G65803 gen1 other downstream 2013330 21629958 ~ 21684828 (-)
ost4 NA other downstream 2123959 21545418 ~ 21574199 (-)
llph llph other downstream 3898556 19795154 ~ 19799602 (-)
G66619 NA other upstream 809407 24507834 ~ 24508281 (-)
G66642 NA other upstream 961597 24660024 ~ 24661902 (-)
LOC103036580 slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 other upstream 1818088 25516515 ~ 25530980 (-)
tmem258 NA other upstream 4334274 28032701 ~ 28035961 (-)
LOC103041081 rbpms2,rbpms2a,LOC107381790,LOC103368877,LOC108275203,LOC107560016,LOC107738652,LOC107680137,LOC107086560 other upstream 4422833 28121260 ~ 28132788 (-)

Expression


Co-expression Network