G66438


Basic Information

Item Value
gene id G66438
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 23911791 ~ 23912473 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89638
taaccctggtttttaatcacagttttcatacatgttggaatgttctcctccaccagtcttgcacactgcttttggataactttatgctactcactcctgatgcaaaagtTCAATTCAGGCAgtgcagtttggtttgatggcttgtgatcatccatcttcatcttgattatattccagaggttttcaatttcatttggtaaaatcaaagaaacccatcatttttaagtggtatcttttatttatttatttttttttccagagctgtatactctTGTTCATGCTGACAAGAGTTCTACTTCATATATGGATGGGGCTTCAGTCATCCCTGattcattttacagtaaatgGGCATACAAGAGGTCCTCAGaagctacttttgggtagtgtacctcttggtgagagactgtTGATTGCTAGACATGCCTTTACAACACATTCAAAAACTTTTTTCctcagttgacagactttgagagggGGTGCATCATAGGTTCTGTCTCTGCCTGTCAGTCAGTCATCCATCATAATTTCTTTCATTTCCTGTGACGTTGTGAACAAGCAACCTGGAattattttgtattaagtgAAGAATCCAGGTGGGTGGGGGGTCGAATACTTCCGGGAAGTCAAAGTATatgacagtcagtcacccctagtagtgatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89638 True 662 lncRNA 0.39 2 23911791 23912473

Neighbor

gene id symbol gene type direction distance location
LOC103047861 LOC107575455 coding downstream 4837 23893562 ~ 23906954 (-)
LOC103028371 NA coding downstream 25005 23872673 ~ 23886786 (-)
LOC107197793 NA coding downstream 44860 23850890 ~ 23866931 (-)
LOC103027854 NA coding downstream 64880 23831703 ~ 23846911 (-)
LOC103027530 syn3,LOC108412895,LOC108279673,LOC106576044 coding downstream 85090 23605752 ~ 23826701 (-)
LOC103022521 NA coding upstream 49501 23961974 ~ 23992813 (-)
LOC111193004 NA coding upstream 82809 23995282 ~ 23999500 (-)
LOC103022829 NA coding upstream 89209 24001682 ~ 24018717 (-)
slc16a7 slc16a7,LOC108248566 coding upstream 317742 24230215 ~ 24268449 (-)
atp23 atp23,LOC106609469,LOC106576246 coding upstream 449534 24362007 ~ 24367573 (-)
G66416 NA non-coding downstream 213364 23698158 ~ 23698427 (-)
G66414 NA non-coding downstream 247822 23602466 ~ 23663969 (-)
G66312 NA non-coding downstream 395208 23508983 ~ 23516583 (-)
G66300 NA non-coding downstream 462005 23449400 ~ 23449786 (-)
G66297 NA non-coding downstream 467144 23444237 ~ 23444647 (-)
G66496 NA non-coding upstream 378115 24290588 ~ 24290790 (-)
G66509 NA non-coding upstream 440828 24353301 ~ 24353703 (-)
G66600 NA non-coding upstream 455640 24368113 ~ 24368356 (-)
G66601 rpap3 non-coding upstream 455965 24368438 ~ 24373280 (-)
G66602 rpap3 non-coding upstream 461428 24373901 ~ 24380582 (-)
dusp16 dusp16 other downstream 751612 23053273 ~ 23160179 (-)
G66081 bcap29 other downstream 1620109 22290685 ~ 22291682 (-)
G65803 gen1 other downstream 2226963 21629958 ~ 21684828 (-)
ost4 NA other downstream 2337592 21545418 ~ 21574199 (-)
llph llph other downstream 4112189 19795154 ~ 19799602 (-)
G66619 NA other upstream 595361 24507834 ~ 24508281 (-)
G66642 NA other upstream 747551 24660024 ~ 24661902 (-)
LOC103036580 slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 other upstream 1604042 25516515 ~ 25530980 (-)
tmem258 NA other upstream 4120228 28032701 ~ 28035961 (-)
LOC103041081 rbpms2,rbpms2a,LOC107381790,LOC103368877,LOC108275203,LOC107560016,LOC107738652,LOC107680137,LOC107086560 other upstream 4208787 28121260 ~ 28132788 (-)

Expression


Co-expression Network