G66472


Basic Information

Item Value
gene id G66472
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 24137905 ~ 24138185 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89679
ccctctgtgtctcctgtctcagtagtttcccaccacatgtctcatttgtagctccgccccttccccaggtgtttccaattctagtgtgtttcctgtttggttaaatagatcccctgtgccacttgtccctcgtcggtctttgcactaacctgtGTTGTTTTGTCGTTCTCGTGTTCTCTAGCTCAGCCCTCGTTTTCATAGCCTTAGCCCTTgtcctttgttctttgtttatcttcttgtttatttctagttccctgatattttcctttgttttctccttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89679 True 281 lncRNA 0.45 1 24137905 24138185

Neighbor

gene id symbol gene type direction distance location
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding upstream 20192 24026461 ~ 24117713 (+)
etv6 etv6 coding upstream 184185 23916306 ~ 23953720 (+)
rerg rerg,LOC107662225,LOC107669035 coding upstream 589648 23451563 ~ 23548257 (+)
lrp6 lrp6,LOC100705426 coding upstream 1052861 23020384 ~ 23085044 (+)
LOC103025638 mansc1 coding upstream 1125132 23004755 ~ 23012773 (+)
lrig3 lrig3,LOC104942525 coding downstream 158732 24296917 ~ 24320066 (+)
LOC111192915 NA coding downstream 321218 24459403 ~ 24461001 (+)
LOC103034593 LOC108442311 coding downstream 372304 24510489 ~ 24517356 (+)
LOC103033942 LOC103033942,LOC108442313 coding downstream 417416 24555601 ~ 24559622 (+)
snupn snupn,LOC107673280,LOC107738646 coding downstream 1240252 25378437 ~ 25387120 (+)
G66389 NA non-coding upstream 159959 23976240 ~ 23977946 (+)
G66382 NA non-coding upstream 225694 23911828 ~ 23912211 (+)
G66353 NA non-coding upstream 316928 23818073 ~ 23820977 (+)
LOC111192880 NA non-coding upstream 538314 23594228 ~ 23599591 (+)
G66338 NA non-coding upstream 542791 23594861 ~ 23595114 (+)
G66476 NA non-coding downstream 47949 24186134 ~ 24186383 (+)
G66480 slc16a7 non-coding downstream 84820 24223005 ~ 24231186 (+)
G66488 NA non-coding downstream 185625 24323810 ~ 24324032 (+)
G66514 NA non-coding downstream 246734 24384919 ~ 24389774 (+)
G66524 mapk12b,LOC103035956,LOC108442322,LOC107658737,LOC108279513,LOC107656379,LOC107710136,LOC107579544,LOC106609457 non-coding downstream 270335 24408520 ~ 24414278 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other upstream 417811 23698152 ~ 23720094 (+)
G66303 NA other upstream 653972 23483333 ~ 23483933 (+)
G66296 NA other upstream 693228 23444174 ~ 23444677 (+)
eps8 eps8 other upstream 814544 23222514 ~ 23323361 (+)
crebl2 crebl2,LOC107707978 other upstream 999894 23131080 ~ 23138011 (+)
rpap3 rpap3 other downstream 229307 24367492 ~ 24383022 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 380437 24518622 ~ 24552340 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other downstream 460981 24599166 ~ 24684580 (+)
cspg4 cspg4 other downstream 1051000 25189185 ~ 25300875 (+)
LOC111192916 NA other downstream 1942267 26080452 ~ 26092119 (+)

Expression


Co-expression Network