G66476


Basic Information

Item Value
gene id G66476
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 24186134 ~ 24186383 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89683
agtataaagtcagggttgggtagaatttctaagttgtaaaatcaatcatgggtaagcagcgcgacctctcaaccggaatagtggctcaaattcaagcccttcgccaacaaggcttgacccaaactaaaattgctgagcagctcggcatcagccagtcttccgtctgcaaagctctcaagaaaaactgcagcaagcgcaccaactgttccggcgtctgaaaaacttctgctcgcgacaacaagcagctgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89683 True 250 lncRNA 0.48 1 24186134 24186383

Neighbor

gene id symbol gene type direction distance location
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding upstream 68421 24026461 ~ 24117713 (+)
etv6 etv6 coding upstream 232414 23916306 ~ 23953720 (+)
rerg rerg,LOC107662225,LOC107669035 coding upstream 637877 23451563 ~ 23548257 (+)
lrp6 lrp6,LOC100705426 coding upstream 1101090 23020384 ~ 23085044 (+)
LOC103025638 mansc1 coding upstream 1173361 23004755 ~ 23012773 (+)
lrig3 lrig3,LOC104942525 coding downstream 110534 24296917 ~ 24320066 (+)
LOC111192915 NA coding downstream 273020 24459403 ~ 24461001 (+)
LOC103034593 LOC108442311 coding downstream 324106 24510489 ~ 24517356 (+)
LOC103033942 LOC103033942,LOC108442313 coding downstream 369218 24555601 ~ 24559622 (+)
snupn snupn,LOC107673280,LOC107738646 coding downstream 1192054 25378437 ~ 25387120 (+)
G66472 NA non-coding upstream 47949 24137905 ~ 24138185 (+)
G66389 NA non-coding upstream 208188 23976240 ~ 23977946 (+)
G66382 NA non-coding upstream 273923 23911828 ~ 23912211 (+)
G66353 NA non-coding upstream 365157 23818073 ~ 23820977 (+)
LOC111192880 NA non-coding upstream 586543 23594228 ~ 23599591 (+)
G66480 slc16a7 non-coding downstream 36622 24223005 ~ 24231186 (+)
G66488 NA non-coding downstream 137427 24323810 ~ 24324032 (+)
G66514 NA non-coding downstream 198536 24384919 ~ 24389774 (+)
G66524 mapk12b,LOC103035956,LOC108442322,LOC107658737,LOC108279513,LOC107656379,LOC107710136,LOC107579544,LOC106609457 non-coding downstream 222137 24408520 ~ 24414278 (+)
G66556 NA non-coding downstream 318958 24505341 ~ 24505541 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other upstream 466040 23698152 ~ 23720094 (+)
G66303 NA other upstream 702201 23483333 ~ 23483933 (+)
G66296 NA other upstream 741457 23444174 ~ 23444677 (+)
eps8 eps8 other upstream 862773 23222514 ~ 23323361 (+)
crebl2 crebl2,LOC107707978 other upstream 1048123 23131080 ~ 23138011 (+)
rpap3 rpap3 other downstream 181109 24367492 ~ 24383022 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 332239 24518622 ~ 24552340 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other downstream 412783 24599166 ~ 24684580 (+)
cspg4 cspg4 other downstream 1002802 25189185 ~ 25300875 (+)
LOC111192916 NA other downstream 1894069 26080452 ~ 26092119 (+)

Expression


Co-expression Network