G66514


Basic Information

Item Value
gene id G66514
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 24384919 ~ 24389774 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89739
TTACTGTagacattaattttatttttttggtatataaacaaaacataattttttaagaACCCTAAAAGTCCTAagtcactttttttgttttaacagtACACATTTGTTCATCAAGCAGCTTTAactctatttctttattttagaacCAAGAAGAACCTTTAGACAGTAGACctttatgtaattttaaaaggAAAGGACCACCATCACCAGCTTTAATTCCCTCTGCTGGATCATGATGGAATAACTACTAATAAGAAAACAGACATCATGCATGAAAACAGCAGTTTTGGCAGCAGCTCCATTTTCTCTGATGAGGACCCAGCAGAGTctcTGAAGAACTGAATTCATGGATTGCTGTGACAAACAATCCAGATATGCTGTTTGTGGCTTGGCAGACGAGGGTCTCTGCGGTGGCCTCTATAGACTGCTTGATGatcacctcatttccagacccaGCAACTGACTCTCCATCAACCACCCAGGTGTAGTTACAGGAGGGTCTGCAGGTTGCACTGCATAGAAACCGCTGACTTTCTCCAGGAGTAATATTAAATGGGCCACTGATGGAAACGTTCACTGGTCCCTCTAAAAAGGACAAAAACAAGTGCTAGTTCtgcatatttttctgttttctcaaAGGAGAAATGAGTGTGGAAGCCTGAAATGATGACCATGATTATATCGTACCCAATATCTGTAGAGTCTTGCTGATGCTGGAGGACTTTTGTGTAGAAGGGTTTTTGGCTGTGCAGGTCACTGTTATGGAGCTCACCCATTGCTTTAAAGTAAACGCCATCTCATTGCCTTCCAAACTCTGGCCATCAAAACCAATCGTGTAATTGCATTCAGGTGAACACTGAGCAAAGCATTCAATGCTAGAGGGCACTCCCACGGTGACTGCATCTGGACCAAAAAAGCTAAGACCCTCTGGACCAgctgaaagagacagacagtcaC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89739 True 957 lncRNA 0.41 3 24384919 24389774

Neighbor

gene id symbol gene type direction distance location
lrig3 lrig3,LOC104942525 coding upstream 64853 24296917 ~ 24320066 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding upstream 267206 24026461 ~ 24117713 (+)
etv6 etv6 coding upstream 431199 23916306 ~ 23953720 (+)
rerg rerg,LOC107662225,LOC107669035 coding upstream 836662 23451563 ~ 23548257 (+)
lrp6 lrp6,LOC100705426 coding upstream 1299875 23020384 ~ 23085044 (+)
LOC111192915 NA coding downstream 69629 24459403 ~ 24461001 (+)
LOC103034593 LOC108442311 coding downstream 120715 24510489 ~ 24517356 (+)
LOC103033942 LOC103033942,LOC108442313 coding downstream 165827 24555601 ~ 24559622 (+)
snupn snupn,LOC107673280,LOC107738646 coding downstream 988663 25378437 ~ 25387120 (+)
ptpn9 ptpn9,ptpn9a,LOC107727494,LOC107673262,LOC107560010 coding downstream 1004661 25394435 ~ 25423664 (+)
G66488 NA non-coding upstream 60887 24323810 ~ 24324032 (+)
G66480 slc16a7 non-coding upstream 153733 24223005 ~ 24231186 (+)
G66476 NA non-coding upstream 198536 24186134 ~ 24186383 (+)
G66472 NA non-coding upstream 246734 24137905 ~ 24138185 (+)
G66389 NA non-coding upstream 406973 23976240 ~ 23977946 (+)
G66524 mapk12b,LOC103035956,LOC108442322,LOC107658737,LOC108279513,LOC107656379,LOC107710136,LOC107579544,LOC106609457 non-coding downstream 18746 24408520 ~ 24414278 (+)
G66556 NA non-coding downstream 115567 24505341 ~ 24505541 (+)
G66577 NA non-coding downstream 189379 24579153 ~ 24579353 (+)
G66643 NA non-coding downstream 328823 24718597 ~ 24718895 (+)
G66656 NA non-coding downstream 421641 24811415 ~ 24816069 (+)
rpap3 rpap3 other upstream 1897 24367492 ~ 24383022 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other upstream 664825 23698152 ~ 23720094 (+)
G66303 NA other upstream 900986 23483333 ~ 23483933 (+)
G66296 NA other upstream 940242 23444174 ~ 23444677 (+)
eps8 eps8 other upstream 1061558 23222514 ~ 23323361 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 128848 24518622 ~ 24552340 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other downstream 209392 24599166 ~ 24684580 (+)
cspg4 cspg4 other downstream 799411 25189185 ~ 25300875 (+)
LOC111192916 NA other downstream 1690678 26080452 ~ 26092119 (+)
oaz2 oaz2,LOC108432726 other downstream 3759486 28149260 ~ 28220857 (+)

Expression


Co-expression Network