G66524 (mapk12b,LOC103035956,LOC108442322,LOC107658737,LOC108279513,LOC107656379,LOC107710136,LOC107579544,LOC106609457)


Basic Information

Item Value
gene id G66524
gene name mapk12b,LOC103035956,LOC108442322,LOC107658737,LOC108279513,LOC107656379,LOC107710136,LOC107579544,LOC106609457
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 24408520 ~ 24414278 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89752
TCTGCCATGATGCAACCAACTGACCAGATATCAaCTGTTTGTGAGTAGTGCATCCAGTTCAGGATGACCTCAGGTGCTCTGTACCACCGAGTTACCACATAACCCGTCATCTCTGAGTCAGCCTGCCGGGCCAGCCCAAAATCTAAAATCTTCAGCTCACAATTCTGATTTACAGCCAGGTTTCCTGGTTTGAGATCTCTGTGAATGATCCCAGCAGAATGAATATACTTCAGTCCCCTCAGCATTTGATATACCAGGAACTGCACCCTGTCTTCACACAATctctccatcttcatcagcttACCAAGATCTGTACCCATGAAGGGCATCACCAAGTAAAAATCCTGGAATCTGTCCAGTGATATTTCAGAAGTGAAGACGTCTAACAGCCCAATCACATTCTCGTGCTTCATGTGTTTTAACAGTCTCAGCTCTCTGTAAGCTCGCTTGGCGAAGAGTCTGGACTGGAATGGACGATGGAGCTTCTTGATGGCCACCCGCACACCTGCCTTGCGGTCAATGGCAGAGCTCACCGTGCCGTACGCGCCCGTGCCCACTTGTATCAGATCGCGGTATCTCTCCGGCACGTCCCACACCGTTTTATTCACCTCCTGTCGGTAAAATCCCGCCCTGATACGAAGTGACATTCTGACCTGAGATAACAGCCTGTATTCTCAGCTCTGAGCTCGAGCATGAGTTCATGTATCCAGTTACTGTGCACGCGCCCTCCTCCACCCCAGACACCCAAACACCACCGCGC
>TU89753
TCTGCCATGATGCAACCAACTGACCAGATATCAaCTGTTTGTGAGTAGTGCATCCAGTTCAGGATGACCTCAGGTGCTCTGTACCACCGAGTTACCACATAACCCGTCATCTCTGAGTCAGCCTGCCGGGCCAGCCCAAAATCTAAAATCTTCAGCTCACAATTCTGATTTACAGCCAGGTTTCCTGGTTTGAGATCTCTGTGAATGATCCCAGCAGAATGAATATACTTCAGTCCCCTCAGCATTTGATATACCAGGAACTGCACCCTGTCTTCACACAATctctccatcttcatcagcttACCAAGATCTGTACCCATGAAGGGCATCACCAAGTAAAAATCCTGGAATCTGTCCAGTGATATTTCAGAAGTGAAGACGTCTAACAGCCCAATCACATTCTCGTGCTTCATGTGTTTTAACAGTCTCAGCTCTCTGTAAGCTCGCTTGGCGAAGAGTCTGGACTGGAATGGACGATGGAGCTTCTTGATGGCCACCCGCACACCTGCCTTGCGGTCAATGGCAGAGC

Function

symbol description
mapk12b Predicted to enable MAP kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human MAPK12 (mitogen-activated protein kinase 12).

NR:

description
mitogen-activated protein kinase 12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89752 True 760 lncRNA 0.50 8 24408520 24414278
TU89753 False 529 lncRNA 0.48 7 24408520 24412117

Neighbor

gene id symbol gene type direction distance location
lrig3 lrig3,LOC104942525 coding upstream 88454 24296917 ~ 24320066 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding upstream 290807 24026461 ~ 24117713 (+)
etv6 etv6 coding upstream 454800 23916306 ~ 23953720 (+)
rerg rerg,LOC107662225,LOC107669035 coding upstream 860263 23451563 ~ 23548257 (+)
lrp6 lrp6,LOC100705426 coding upstream 1323476 23020384 ~ 23085044 (+)
LOC111192915 NA coding downstream 45125 24459403 ~ 24461001 (+)
LOC103034593 LOC108442311 coding downstream 96211 24510489 ~ 24517356 (+)
LOC103033942 LOC103033942,LOC108442313 coding downstream 141323 24555601 ~ 24559622 (+)
snupn snupn,LOC107673280,LOC107738646 coding downstream 964159 25378437 ~ 25387120 (+)
ptpn9 ptpn9,ptpn9a,LOC107727494,LOC107673262,LOC107560010 coding downstream 980157 25394435 ~ 25423664 (+)
G66514 NA non-coding upstream 18746 24384919 ~ 24389774 (+)
G66488 NA non-coding upstream 84488 24323810 ~ 24324032 (+)
G66480 slc16a7 non-coding upstream 177334 24223005 ~ 24231186 (+)
G66476 NA non-coding upstream 222137 24186134 ~ 24186383 (+)
G66472 NA non-coding upstream 270335 24137905 ~ 24138185 (+)
G66556 NA non-coding downstream 91063 24505341 ~ 24505541 (+)
G66577 NA non-coding downstream 164875 24579153 ~ 24579353 (+)
G66643 NA non-coding downstream 304319 24718597 ~ 24718895 (+)
G66656 NA non-coding downstream 397137 24811415 ~ 24816069 (+)
G66657 NA non-coding downstream 413263 24827541 ~ 24827807 (+)
rpap3 rpap3 other upstream 25498 24367492 ~ 24383022 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other upstream 688426 23698152 ~ 23720094 (+)
G66303 NA other upstream 924587 23483333 ~ 23483933 (+)
G66296 NA other upstream 963843 23444174 ~ 23444677 (+)
eps8 eps8 other upstream 1085159 23222514 ~ 23323361 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other downstream 104344 24518622 ~ 24552340 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other downstream 184888 24599166 ~ 24684580 (+)
cspg4 cspg4 other downstream 774907 25189185 ~ 25300875 (+)
LOC111192916 NA other downstream 1666174 26080452 ~ 26092119 (+)
oaz2 oaz2,LOC108432726 other downstream 3734982 28149260 ~ 28220857 (+)

Expression


Co-expression Network