G66642


Basic Information

Item Value
gene id G66642
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 24660024 ~ 24661902 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU89906
CAGAGTTAATTTTTATGCATTTACATCTAtttgactttatttaaaaactcatattttctatatttatgcatttaaatttattattatctaGATAATTTAACCAATTCTAAAATGTATTGAATGTAATTAGTTAATACATACTAACATGGTTTAAATAATCAGAGccctaaaacaaacaagaatctgttatgtaaaatgtatgtgaTTGGTTTTCATAAAAGTTATGAGAAGTGAAATGGGGAAAATGGAAACGATGTCCTGCCAGTAGGTGGCGGTAATGCCCCTTTACGTTGGTTGCCAATTGCTATAAAActcgaagaagaagaagaagaaaactatTATGGTCTGGACTGGCAGTTGAATGTGGCTACAACTTACGTCCATGTGAGAAGGTACCTAGTATTTTTCTACTTTTCCTATCCTGTTTTCTCACCTCCATGTTGCAACATAGATTTAGTTCTGCAAATTGTGTGACAGGTTATTACCTACTAGGTATGAGTTAGGTATGGATGGTCAGACAGACAACCTGATCAACCTGAGTGGAGTAAAGCAAGGTGCTGGTGTGGTGAAGAAGaaTGAAGACATCAATGTGAGGTGTGATTGTGTGCTGAGCTGTCTGAGCATCTACCTCAGTGAAGACCTGGACACATTGGTTAAAGAATACATGGCAGCTGAGGATCTGAGGCAGTACATAAAGCTGAAGCCAGATGTCAAAAGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89906 True 719 TUCP 0.36 5 24660024 24661902

Neighbor

gene id symbol gene type direction distance location
LOC103033632 LOC103033632 coding downstream 107661 24548268 ~ 24552363 (-)
apex1 apex1,LOC107658891,LOC107656416,LOC107579619,LOC107725930 coding downstream 133913 24518610 ~ 24526111 (-)
LOC111193006 NA coding downstream 163778 24493004 ~ 24496246 (-)
LOC103035119 NA coding downstream 181129 24468271 ~ 24478895 (-)
LOC107197568 NA coding downstream 212546 24444549 ~ 24447478 (-)
snx33 snx33,LOC107680142 coding upstream 674815 25336717 ~ 25377155 (-)
LOC103037725 crabp1,crabp1a,LOC105895658,LOC107680155,LOC107673308 coding upstream 813964 25475866 ~ 25497521 (-)
LOC111193008 NA coding upstream 1583858 26245760 ~ 26250947 (-)
trhde trhde,si:ch211-149p5.1,si:ch211-198g19.1,LOC107590972,LOC107710683 coding upstream 1623399 26285301 ~ 26778380 (-)
cpm NA coding upstream 2310742 26972644 ~ 27060138 (-)
G66627 NA non-coding downstream 126152 24532271 ~ 24533872 (-)
G66623 NA non-coding downstream 147472 24512160 ~ 24512552 (-)
LOC111192882 NA non-coding downstream 207324 24447678 ~ 24452700 (-)
G66602 rpap3 non-coding downstream 279442 24373901 ~ 24380582 (-)
G66601 rpap3 non-coding downstream 286744 24368438 ~ 24373280 (-)
G66646 NA non-coding upstream 86561 24748463 ~ 24748736 (-)
G66651 NA non-coding upstream 124638 24786540 ~ 24786761 (-)
G66652 NA non-coding upstream 127816 24789718 ~ 24790004 (-)
G66676 NA non-coding upstream 372117 25034019 ~ 25034381 (-)
G66678 NA non-coding upstream 387107 25049009 ~ 25049342 (-)
G66619 NA other downstream 151743 24507834 ~ 24508281 (-)
dusp16 dusp16 other downstream 1499845 23053273 ~ 23160179 (-)
G66081 bcap29 other downstream 2368342 22290685 ~ 22291682 (-)
G65803 gen1 other downstream 2975196 21629958 ~ 21684828 (-)
ost4 NA other downstream 3085825 21545418 ~ 21574199 (-)
LOC103036580 slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 other upstream 854613 25516515 ~ 25530980 (-)
tmem258 NA other upstream 3370799 28032701 ~ 28035961 (-)
LOC103041081 rbpms2,rbpms2a,LOC107381790,LOC103368877,LOC108275203,LOC107560016,LOC107738652,LOC107680137,LOC107086560 other upstream 3459358 28121260 ~ 28132788 (-)
fuk fuk other upstream 4781454 29443356 ~ 29467227 (-)
atp6v1f atp6v1f,LOC101079638,LOC106511462,LOC104938441 other upstream 5936466 30598368 ~ 30600908 (-)

Expression


Co-expression Network