G66748


Basic Information

Item Value
gene id G66748
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 25560494 ~ 25561181 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU90033
TGGAAGAAGACAGCAGGACAATAATACAGACTGGAACAAGATTGCAGGACAATAATATATACAGGAAGAAGACAGCAGGGCATTAATACAGACTGGAAAAGGGTGGGACAATAATACAGACTGGAACAAGATTGCAGGACAATATATACAGGAAGAAGACAGCAGGGCATTAATGCAGACTGGAAAAGAACGCAGGACAGTAATACAGACTGGAAAAGATTGCAGGACAATAATACAGACTGGAACAAGATTGCAGGACAATAATACATACTGGAAGCAGACAGCAGTACaataacacagaaacacaaaaagaGACTGGGAGAAGACGACAGGACAATAATAGAGACTGGGAGAAGACAGCAGGACAATAATAGAGACTGGGAGAAGCCAGCAGGACAATAATAGAGACTGGGAGAAGCCAGCAGGACAATAATAGAGACTGGGAGAAGACAGAAGGACAATAATACAGATTGGGAGAAGACAGAAGTACAATAATACAGACTGGAAGAAGATGGCATGACAATAATACAGACTGGAAGAAGACAGCAGGACAGTAATAAAGACTGGAAGAAGACAGATGGACAATAACAGAGACTGGGAGAATACAGCAGGACAATAATAGAGACTGGGAGAAGACAGCAGGGCAATAATACAGCAAAACAGGGGCGGGGCTATAATACAGACTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90033 True 688 lncRNA 0.42 1 25560494 25561181

Neighbor

gene id symbol gene type direction distance location
ireb2 ireb2 coding upstream 12826 25531046 ~ 25547668 (+)
wdr61 wdr61 coding upstream 45146 25508880 ~ 25515348 (+)
sin3a sin3a coding upstream 111238 25426737 ~ 25449256 (+)
ptpn9 ptpn9,ptpn9a,LOC107727494,LOC107673262,LOC107560010 coding upstream 136830 25394435 ~ 25423664 (+)
snupn snupn,LOC107673280,LOC107738646 coding upstream 173374 25378437 ~ 25387120 (+)
LOC103026250 gnai1,LOC107590838,LOC108279833,LOC107386448,LOC100706147,LOC107680033,LOC106609493 coding downstream 16705 25577886 ~ 25609148 (+)
LOC103027045 magi2 coding downstream 143096 25704277 ~ 26025417 (+)
nup107 nup107,LOC107710680,LOC107590859 coding downstream 482066 26043247 ~ 26069392 (+)
slc35e3 slc35e3,LOC107737854,LOC107710682 coding downstream 511404 26072585 ~ 26081131 (+)
mdm2 mdm2,LOC107577534,LOC106599688 coding downstream 543576 26104757 ~ 26118299 (+)
G66739 NA non-coding upstream 40947 25478860 ~ 25519547 (+)
G66718 snx33,LOC107680142,LOC107560006,LOC107673279 non-coding upstream 220038 25335335 ~ 25340456 (+)
G66714 NA non-coding upstream 226052 25328781 ~ 25334442 (+)
G66712 NA non-coding upstream 253511 25306619 ~ 25306983 (+)
G66710 NA non-coding upstream 300921 25258379 ~ 25259573 (+)
G66755 NA non-coding downstream 9657 25570838 ~ 25572159 (+)
G66756 NA non-coding downstream 14674 25575855 ~ 25576194 (+)
G66833 NA non-coding downstream 51705 25612886 ~ 25614889 (+)
G66837 NA non-coding downstream 71612 25632793 ~ 25633083 (+)
G66842 NA non-coding downstream 127223 25688404 ~ 25689235 (+)
cspg4 cspg4 other upstream 259619 25189185 ~ 25300875 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other upstream 875914 24599166 ~ 24684580 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other upstream 1008154 24518622 ~ 24552340 (+)
rpap3 rpap3 other upstream 1177472 24367492 ~ 24383022 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other upstream 1840400 23698152 ~ 23720094 (+)
LOC111192916 NA other downstream 519271 26080452 ~ 26092119 (+)
oaz2 oaz2,LOC108432726 other downstream 2588079 28149260 ~ 28220857 (+)
G67459 NA other downstream 3995955 29557136 ~ 29558666 (+)
G67453 cat,LOC102775586,LOC102293936 other downstream 4024795 29585976 ~ 29592287 (+)
LOC111193014 NA other downstream 4726354 30287535 ~ 30289624 (+)

Expression


Co-expression Network