G66842


Basic Information

Item Value
gene id G66842
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 25688404 ~ 25689235 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU90156
tcaggtcgttggatgatttagagagaatgtgcaaagaggaatggtcaaagatccctctttctgtattctcccatcttgtgaaacattacaggagaagattaggtgctgttttgttggcaaaagggggttgtacaaagtattaacatcaggggtgctaataattgtggcacacatgatttgatgttaaataattatttcttaatgtgggattttttttcctactgaataaattcacttgagttaaaggttgtattttactctttttttccatcgtggtcctatattattttgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90156 True 294 lncRNA 0.35 2 25688404 25689235

Neighbor

gene id symbol gene type direction distance location
LOC103026250 gnai1,LOC107590838,LOC108279833,LOC107386448,LOC100706147,LOC107680033,LOC106609493 coding upstream 79256 25577886 ~ 25609148 (+)
ireb2 ireb2 coding upstream 140736 25531046 ~ 25547668 (+)
wdr61 wdr61 coding upstream 173056 25508880 ~ 25515348 (+)
sin3a sin3a coding upstream 239148 25426737 ~ 25449256 (+)
ptpn9 ptpn9,ptpn9a,LOC107727494,LOC107673262,LOC107560010 coding upstream 264740 25394435 ~ 25423664 (+)
LOC103027045 magi2 coding downstream 15042 25704277 ~ 26025417 (+)
nup107 nup107,LOC107710680,LOC107590859 coding downstream 354012 26043247 ~ 26069392 (+)
slc35e3 slc35e3,LOC107737854,LOC107710682 coding downstream 383350 26072585 ~ 26081131 (+)
mdm2 mdm2,LOC107577534,LOC106599688 coding downstream 415522 26104757 ~ 26118299 (+)
LOC111192885 NA coding downstream 1807560 27496795 ~ 27497727 (+)
G66837 NA non-coding upstream 55321 25632793 ~ 25633083 (+)
G66833 NA non-coding upstream 73515 25612886 ~ 25614889 (+)
G66756 NA non-coding upstream 112210 25575855 ~ 25576194 (+)
G66755 NA non-coding upstream 116245 25570838 ~ 25572159 (+)
G66748 NA non-coding upstream 127223 25560494 ~ 25561181 (+)
G66851 NA non-coding downstream 26741 25715976 ~ 25716238 (+)
G66854 NA non-coding downstream 48152 25737387 ~ 25770761 (+)
G66844 NA non-coding downstream 336745 26025980 ~ 26071155 (+)
LOC111192883 NA non-coding downstream 402965 26092200 ~ 26093105 (+)
G66982 NA non-coding downstream 464180 26153415 ~ 26153644 (+)
cspg4 cspg4 other upstream 387529 25189185 ~ 25300875 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other upstream 1003824 24599166 ~ 24684580 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other upstream 1136064 24518622 ~ 24552340 (+)
rpap3 rpap3 other upstream 1305382 24367492 ~ 24383022 (+)
LOC103027234 timp3,LOC108412896,LOC106609153,LOC103152565 other upstream 1968310 23698152 ~ 23720094 (+)
LOC111192916 NA other downstream 391217 26080452 ~ 26092119 (+)
oaz2 oaz2,LOC108432726 other downstream 2460025 28149260 ~ 28220857 (+)
G67459 NA other downstream 3867901 29557136 ~ 29558666 (+)
G67453 cat,LOC102775586,LOC102293936 other downstream 3896741 29585976 ~ 29592287 (+)
LOC111193014 NA other downstream 4598300 30287535 ~ 30289624 (+)

Expression


Co-expression Network