G66982



Basic Information


Item Value
gene id G66982
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 26153415 ~ 26153644 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU90326
cacataacctagttaacttagccagttaactaacacacacataacctagctaactaacacacatttaaactagctaactaacacacacataacctagttaacttagccagttaactaacacacacataacctagctaactaacacacatttaaactagctaactaacacacacataacctagttaacttagccagttaactaacacacacataacctagttaacttagcc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU90326 True 230 lncRNA 0.35 1 26153415 26153644

Neighbor


gene id symbol gene type direction distance location
mdm2 mdm2,LOC107577534,LOC106599688 coding upstream 35116 26104757 ~ 26118299 (+)
slc35e3 slc35e3,LOC107737854,LOC107710682 coding upstream 72284 26072585 ~ 26081131 (+)
nup107 nup107,LOC107710680,LOC107590859 coding upstream 84023 26043247 ~ 26069392 (+)
LOC103027045 magi2 coding upstream 127998 25704277 ~ 26025417 (+)
LOC103026250 gnai1,LOC107590838,LOC108279833,LOC107386448,LOC100706147,LOC107680033,LOC106609493 coding upstream 544267 25577886 ~ 25609148 (+)
LOC111192885 NA coding downstream 1343151 27496795 ~ 27497727 (+)
LOC103045890 LOC108432719 coding downstream 1807073 27960717 ~ 27981189 (+)
tmem138 tmem138,LOC105904230,LOC107561148,LOC107551428,LOC107655161 coding downstream 1872233 28025877 ~ 28031998 (+)
ptn ptn,LOC106609498 coding downstream 2200418 28354062 ~ 28457012 (+)
rtcb rtcb coding downstream 3009034 29162678 ~ 29174983 (+)
LOC111192883 NA non-coding upstream 60310 26092200 ~ 26093105 (+)
G66844 NA non-coding upstream 82260 26025980 ~ 26071155 (+)
G66854 NA non-coding upstream 382654 25737387 ~ 25770761 (+)
G66851 NA non-coding upstream 437177 25715976 ~ 25716238 (+)
G66842 NA non-coding upstream 464180 25688404 ~ 25689235 (+)
G66987 NA non-coding downstream 43777 26197421 ~ 26198071 (+)
G67028 NA non-coding downstream 303411 26457055 ~ 26461093 (+)
G67059 NA non-coding downstream 642828 26796472 ~ 26797829 (+)
G67060 NA non-coding downstream 644825 26798469 ~ 26798977 (+)
G67066 NA non-coding downstream 819000 26972644 ~ 26973143 (+)
LOC111192916 NA other upstream 61296 26080452 ~ 26092119 (+)
cspg4 cspg4 other upstream 852540 25189185 ~ 25300875 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other upstream 1468835 24599166 ~ 24684580 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other upstream 1601075 24518622 ~ 24552340 (+)
rpap3 rpap3 other upstream 1770393 24367492 ~ 24383022 (+)
oaz2 oaz2,LOC108432726 other downstream 1995616 28149260 ~ 28220857 (+)
G67459 NA other downstream 3403492 29557136 ~ 29558666 (+)
G67453 cat,LOC102775586,LOC102293936 other downstream 3432332 29585976 ~ 29592287 (+)
LOC111193014 NA other downstream 4133891 30287535 ~ 30289624 (+)
G67690 atp6v1f,LOC101079638,LOC106511462,LOC104938441 other downstream 4444957 30598601 ~ 30600595 (+)

Expression



Co-expression Network