G67278


Basic Information

Item Value
gene id G67278
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 28312287 ~ 28312550 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU90704
atataggaccacgatgggaaaaaaaagtaaagtccaacctttaactcaagtgaattttaagggggaaataaaatccctgactaagaaataattattcttcataaaatcacctgttccacaattattggcacccctaacaattcttaggaaataaatttaataaaagtatttctgtcacttctacagtagtttacgaagttgatcagagtatgtaggaacatttaattagtaattcacaacttcctgtttccctggggtataaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90704 True 264 lncRNA 0.32 1 28312287 28312550

Neighbor

gene id symbol gene type direction distance location
tmem138 tmem138,LOC105904230,LOC107561148,LOC107551428,LOC107655161 coding upstream 280289 28025877 ~ 28031998 (+)
LOC103045890 LOC108432719 coding upstream 331098 27960717 ~ 27981189 (+)
LOC111192885 NA coding upstream 814560 27496795 ~ 27497727 (+)
mdm2 mdm2,LOC107577534,LOC106599688 coding upstream 2193988 26104757 ~ 26118299 (+)
slc35e3 slc35e3,LOC107737854,LOC107710682 coding upstream 2231156 26072585 ~ 26081131 (+)
ptn ptn,LOC106609498 coding downstream 41512 28354062 ~ 28457012 (+)
rtcb rtcb coding downstream 850128 29162678 ~ 29174983 (+)
commd9 commd9 coding downstream 1126011 29438561 ~ 29441531 (+)
LOC103033872 NA coding downstream 1188177 29500727 ~ 29503311 (+)
LOC103030285 NA coding downstream 1514929 29827479 ~ 29832721 (+)
G67225 psma4,LOC105018690,LOC104929549,LOC107680153,LOC107562288,LOC107560014 non-coding upstream 82782 28223107 ~ 28229505 (+)
G67224 NA non-coding upstream 148962 28162591 ~ 28163325 (+)
G67213 NA non-coding upstream 179498 28126097 ~ 28132789 (+)
G67218 NA non-coding upstream 202401 28109476 ~ 28109886 (+)
G67207 NA non-coding upstream 266074 28044402 ~ 28046213 (+)
G67279 NA non-coding downstream 11171 28323721 ~ 28324106 (+)
G67318 NA non-coding downstream 414033 28726583 ~ 28729171 (+)
G67320 NA non-coding downstream 415670 28728220 ~ 28728707 (+)
G67331 NA non-coding downstream 833843 29146393 ~ 29149675 (+)
LOC111193011 NA non-coding downstream 899225 29211775 ~ 29354073 (+)
oaz2 oaz2,LOC108432726 other upstream 91430 28149260 ~ 28220857 (+)
LOC111192916 NA other upstream 2220168 26080452 ~ 26092119 (+)
cspg4 cspg4 other upstream 3011412 25189185 ~ 25300875 (+)
lingo1 lingo1,LOC107673268,LOC107727415,LOC107562294,LOC107680146,LOC107560004 other upstream 3627707 24599166 ~ 24684580 (+)
osgep apex1,osgep,LOC107658891,LOC107656416,LOC107579619,LOC102796710,LOC103033632 other upstream 3759947 24518622 ~ 24552340 (+)
G67459 NA other downstream 1244586 29557136 ~ 29558666 (+)
G67453 cat,LOC102775586,LOC102293936 other downstream 1273426 29585976 ~ 29592287 (+)
LOC111193014 NA other downstream 1974985 30287535 ~ 30289624 (+)
G67690 atp6v1f,LOC101079638,LOC106511462,LOC104938441 other downstream 2286051 30598601 ~ 30600595 (+)
G67692 arf5,zgc:77650,LOC105916194,LOC101172462,LOC107387912,LOC105020167,LOC105888566 other downstream 2295825 30608375 ~ 30611978 (+)

Expression


Co-expression Network