G67640


Basic Information

Item Value
gene id G67640
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 30317890 ~ 30328126 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU91241
TAAAAACCTGTaagtagggctgtccctaacgattattttttaaacgattattctaacgattatttttttcgattagtcgactaatctattcattgagaaacatatttaaataattattttacgttttaaagcaaacgataaattactatatttatatataataacaacaacaacaacaccacaagcctactaaaccaaaccccacacttataatcacttacatgtacagcacgttgtttagatctataacgctaaaaatggataagctcccatacaccacaaccgtgtgttgcactgttttctgtgaccgctagattttgtgaccactggcaagtagttctcagcagaccggtgcactggccgattcgaaacgtgttcgtttctaatgtttaccccgactggccaaaacggttcagtttagggctgagggtaaggtgtaggtatagaaagcttccgttttgccaatgaacgctcataaccgtgagcactggtcacaaaattccgacggtgacagaaaacggtgtgacaccgcagcgccgacggcgctagctaaaataacttaaggcagctagcttagctaaacacctgaacttatgaataatgctactgtttctggaaactgcgaaatgccatgcacaaatataaaccaaaactgtataatttctgcctgtggcaggtttaaaacctttggtagacagccttaagtctttttaaggacacccgcggagaccctgatgtaaacggtaacttactgtgtgaccctgttgacatagtgctcctggatgtttgcgcttcaagtgctccttttgcacgtatggcagaggaccacattgttgcccttttgcgtgaaatgctcccaaactttagatgcccgctggcgtttttttgtagctggagattgctctccggagtccaagctctctagagcttagattctctgcccgaacccgacatgacccgaggcccgcccgtaaatccgacccgggctccagaaaatagtccgagatgtaggcgtctgttttttaattatatttttattttaaaaaaaataacgaaaactgaaagtgaaactaaactaatttatttataagcgctgttttcactaccgcagttctacagcgggggtgttgtgccgattctgtccgcgaagcgggagtcagattcagcagagagtcggattcggcacaaacgcggcggcacctcgcggtccgcggtgtcagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91241 True 1221 lncRNA 0.44 2 30317890 30328126

Neighbor

gene id symbol gene type direction distance location
LOC103043802 impdh1b,LOC108432555,LOC104968094,LOC107725554 coding downstream 36493 30236929 ~ 30281397 (-)
hmg20a hmg20a,LOC107560003,LOC107727687 coding downstream 473283 29834082 ~ 29844607 (-)
LOC103022709 peak1 coding downstream 505329 29665345 ~ 29812561 (-)
LOC103031543 NA coding downstream 661497 29639675 ~ 29656393 (-)
LOC103032078 LOC108437708,LOC108275412 coding downstream 681160 29623051 ~ 29636730 (-)
irf5 irf5 coding upstream 9411 30337537 ~ 30371368 (-)
LOC103025989 LOC108432518 coding upstream 49055 30377181 ~ 30406547 (-)
LOC103025686 drd4-rs,LOC108432516,LOC107591318,LOC107738833,LOC107557292,LOC107732971,LOC107699035 coding upstream 98333 30426459 ~ 30473893 (-)
LOC103041847 arf5,zgc:77650,LOC105916194,LOC106511461,LOC105888566,LOC105020167,LOC106609140 coding upstream 278346 30606472 ~ 30611944 (-)
dennd6b dennd6b,LOC107732989,LOC107738816 coding upstream 296498 30624624 ~ 30642727 (-)
G67629 NA non-coding downstream 40302 30277163 ~ 30277588 (-)
G67628 LOC108432554 non-coding downstream 81175 30233873 ~ 30236715 (-)
G67575 NA non-coding downstream 252196 30065359 ~ 30065694 (-)
G67572 NA non-coding downstream 277402 30040265 ~ 30040488 (-)
G67566 NA non-coding downstream 381946 29935705 ~ 29935944 (-)
G67672 NA non-coding upstream 96458 30424584 ~ 30425454 (-)
G67674 NA non-coding upstream 99832 30427958 ~ 30428487 (-)
G67675 NA non-coding upstream 118614 30446740 ~ 30446942 (-)
G67676 NA non-coding upstream 119431 30447557 ~ 30468713 (-)
G67679 NA non-coding upstream 157526 30485652 ~ 30485914 (-)
fuk fuk other downstream 850663 29443356 ~ 29467227 (-)
LOC103041081 rbpms2,rbpms2a,LOC107381790,LOC103368877,LOC108275203,LOC107560016,LOC107738652,LOC107680137,LOC107086560 other downstream 2185102 28121260 ~ 28132788 (-)
tmem258 NA other downstream 2281929 28032701 ~ 28035961 (-)
LOC103036580 slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 other downstream 4786910 25516515 ~ 25530980 (-)
G66642 NA other downstream 5655988 24660024 ~ 24661902 (-)
atp6v1f atp6v1f,LOC101079638,LOC106511462,LOC104938441 other upstream 270242 30598368 ~ 30600908 (-)
G67755 NA other upstream 474584 30802710 ~ 30805567 (-)
G67830 NA other upstream 647751 30975877 ~ 30992883 (-)
tmem60 tmem60 other upstream 752654 31080780 ~ 31091017 (-)
G67863 NA other upstream 765620 31093746 ~ 31149733 (-)

Expression


Co-expression Network