Gene
RNA
| Item | Value |
|---|---|
| gene id | G67755 |
| gene name | NA |
| gene type | unknown |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035903.1 |
| NCBI id | CM008306.1 |
| chromosome length | 40813162 |
| location | 30802710 ~ 30805567 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| GO:0021532 | neural tube patterning | biological_process |
| GO:0043009 | chordate embryonic development | biological_process |
| GO:0048513 | animal organ development | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0009890 | negative regulation of biosynthetic process | biological_process |
| GO:0031327 | negative regulation of cellular biosynthetic process | biological_process |
| GO:1902679 | negative regulation of RNA biosynthetic process | biological_process |
| GO:0021903 | rostrocaudal neural tube patterning | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0051253 | negative regulation of RNA metabolic process | biological_process |
| GO:1903507 | negative regulation of nucleic acid-templated transcription | biological_process |
| GO:0021915 | neural tube development | biological_process |
| GO:0009952 | anterior/posterior pattern specification | biological_process |
| GO:0045892 | negative regulation of transcription, DNA-templated | biological_process |
| GO:0003002 | regionalization | biological_process |
| GO:0007389 | pattern specification process | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0007417 | central nervous system development | biological_process |
| GO:0010558 | negative regulation of macromolecule biosynthetic process | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | biological_process |
| GO:0030917 | midbrain-hindbrain boundary development | biological_process |
| GO:0060322 | head development | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0009792 | embryo development ending in birth or egg hatching | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU91422 | True | 2423 | TUCP | 0.60 | 2 | 30802710 | 30805567 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrrc17 | LOC108432517 | coding | downstream | 54663 | 30723983 ~ 30748047 (-) |
| cep83 | cep83 | coding | downstream | 83197 | 30710078 ~ 30719513 (-) |
| LOC103040108 | NA | coding | downstream | 94572 | 30688941 ~ 30708138 (-) |
| fam3c | fam3c,LOC106576502 | coding | downstream | 123478 | 30671334 ~ 30679232 (-) |
| dennd6b | dennd6b,LOC107732989,LOC107738816 | coding | downstream | 159983 | 30624624 ~ 30642727 (-) |
| fgl2 | NA | coding | upstream | 7465 | 30813032 ~ 30816251 (-) |
| gsap | gsap | coding | upstream | 39561 | 30845128 ~ 30883051 (-) |
| prr5 | prr5,LOC107738569,LOC106573370 | coding | upstream | 372988 | 31178555 ~ 31239388 (-) |
| ncaph2 | LOC108262276 | coding | upstream | 458401 | 31263968 ~ 31278884 (-) |
| apaf1 | apaf1,LOC107576431,LOC107576430 | coding | upstream | 1216153 | 32021720 ~ 32089434 (-) |
| LOC111192887 | NA | non-coding | downstream | 42856 | 30758899 ~ 30759854 (-) |
| G67683 | NA | non-coding | downstream | 277616 | 30517322 ~ 30525094 (-) |
| G67682 | NA | non-coding | downstream | 304463 | 30497721 ~ 30498247 (-) |
| G67679 | NA | non-coding | downstream | 316796 | 30485652 ~ 30485914 (-) |
| G67676 | NA | non-coding | downstream | 333997 | 30447557 ~ 30468713 (-) |
| G67841 | NA | non-coding | upstream | 192845 | 30998412 ~ 31005633 (-) |
| G67846 | NA | non-coding | upstream | 210416 | 31015983 ~ 31018605 (-) |
| G67847 | NA | non-coding | upstream | 213763 | 31019330 ~ 31022688 (-) |
| LOC111192888 | NA | non-coding | upstream | 268255 | 31073822 ~ 31076578 (-) |
| G67876 | NA | non-coding | upstream | 374631 | 31180198 ~ 31181368 (-) |
| atp6v1f | atp6v1f,LOC101079638,LOC106511462,LOC104938441 | other | downstream | 201802 | 30598368 ~ 30600908 (-) |
| fuk | fuk | other | downstream | 1335483 | 29443356 ~ 29467227 (-) |
| LOC103041081 | rbpms2,rbpms2a,LOC107381790,LOC103368877,LOC108275203,LOC107560016,LOC107738652,LOC107680137,LOC107086560 | other | downstream | 2669922 | 28121260 ~ 28132788 (-) |
| tmem258 | NA | other | downstream | 2766749 | 28032701 ~ 28035961 (-) |
| LOC103036580 | slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 | other | downstream | 5271730 | 25516515 ~ 25530980 (-) |
| G67830 | NA | other | upstream | 170310 | 30975877 ~ 30992883 (-) |
| tmem60 | tmem60 | other | upstream | 275213 | 31080780 ~ 31091017 (-) |
| G67863 | NA | other | upstream | 288179 | 31093746 ~ 31149733 (-) |
| G68081 | NA | other | upstream | 1072540 | 31878107 ~ 31885940 (-) |
| btg1 | btg1,LOC107659850,LOC107585922,LOC107725570,LOC107690792 | other | upstream | 1672068 | 32477635 ~ 32582304 (-) |
