CI01000010_02726989_02731906


Basic Information

Item Value
gene id CI01000010_02726989_02731906
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 2726552 ~ 2732361 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_02726989_02731906.mRNA
GTATATAAAAGTTATAAATCACACACACACCCCACCATTACTTAATAACATACAGGTTCAAGCTTCATATTTGCAGTTAGCTTGGATGGATGGTCTATATCATAAGTGGTAGGAGCATTTTGTGTGTTTTGAAAGCCGCGTATCTGCAGAACATCAGCCCAACTTGTTGGACACAGATGTCCAGTATAGACGGCCCTTTAATGGCAACAAGTGTCTCTGCTTTATTGCACGGCTGTTCGAAGCTTCCGGCGTGTCGTAAAAGCAATCAGAGTGTATTTCCAAGCTGCAAATCTGTCAGGAACGTCTGGATTATTTAGTTGGAAAAGTAATTTGAGGCTTCGTTTACAAAGTGATTGTTGTATTTGGAGTGTTGAGGTGCAAGCATGACTTGTGGCGGCTTTTCTTTTCTTCTTTTCTTTTTTTTTTTTGTCTTTCTGATGGCTTTAGCAGTCCCTGTCAGCGTTCCCACACCAGAAAAAGTTGTTGCCTGGTTTATTGCCAGCATACTTCCAGGAGAGGATTTCGCTCTCCATCTCTTCGCACTCAGGTTAATGAGAACAGAAGGAAATGGCTGCAATGTTGTGGCGGTCTTTAATAGCTCATTTGTGTTGAGCAGAGATCTAAGCACACTCATTCTATTTACCCTCAGAGTTCTGATGAAGCTTATTTACGTTCTGACTAGTGTTTTACCTTTCCAGTCTGGTTCAGGCTGCCTGGTCTCTATTTGTCATTCTTTTCTTCTCTTTCCTGTCGTTGTGTGCGCCATCAGCACCTATAAGAGTTTGAAGAGTTGCGTCAGGATCTCGACGACAGTGACAAACTCAGTTCTTCACTTTAGCCGAATTCCCCTTTGACTGAACCGCATTGCGGTTGTGCTGGGATTGTTAATGTCTCCTTTGTTCTTTTCTCCATAATAGAGTTCAGAGGTGAGCGGCCTGCTGGGGATGCGGGTGACTCAGGCTGACTTGGCTAGGTTGAGCTCCTGGTCCTTTCGTAGAAGACGGTGTGAAAAGCCGCTTTGTATCCCACTTTTCCTGGCACATGCGCAGAGCTGTATTTCAGTGGGCTGCTCTTATCCTCTCCAGCAACCTGTTGCAGCTTAGTTCAATTGCATTGTTTCTTTAGTTGTATTGGAAATCAGTTGGGACCTGATGACATCTTAGTCATGATATTATCCTGCCATTCTTTATGTTTAGCGTGTTAGCACACACGGTGATACATTGTCATCTTTTAGTCGTTTTCTCATTCATCTTCATTGGTTTTCGGTGCTTGCGCAATTATATTCTTAGCTTGTATTGATTTTGTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_02726989_02731906.mRNA True 1309 mRNA 0.43 4 2726552 2732361

Neighbor

gene id symbol gene type direction distance location
CI01000010_02719044_02722011 NA coding upstream 4502 2718771 ~ 2722050 (+)
CI01000010_02669932_02681563 MLLT1, MLLT1A coding upstream 44871 2669932 ~ 2681681 (+)
CI01000010_02659006_02662902 ACER1 coding upstream 62773 2659006 ~ 2663779 (+)
CI01000010_02643660_02652177 MYO1F coding upstream 73903 2643660 ~ 2652649 (+)
CI01000010_02584071_02625169 ADAMTS10 coding upstream 100593 2584071 ~ 2625959 (+)
CI01000010_02734548_02755209 RFX2 coding downstream 2187 2734548 ~ 2755791 (+)
CI01000010_02805903_02806462 NA coding downstream 73301 2805662 ~ 2806843 (+)
CI01000010_02821021_02827050 NA coding downstream 88660 2821021 ~ 2827217 (+)
CI01000010_02847074_02911612 NA coding downstream 114713 2847074 ~ 2911612 (+)
CI01000010_03017924_03021246 FAM78BA, FAM78BB, FAM78B coding downstream 284855 3017216 ~ 3022870 (+)
G61656 NA non-coding upstream 15179 2710658 ~ 2711373 (+)
G61654 NA non-coding upstream 17295 2708962 ~ 2709257 (+)
G61653 NA non-coding upstream 17640 2708692 ~ 2708912 (+)
G61652 NA non-coding upstream 17990 2708242 ~ 2708562 (+)
G61650 NA non-coding upstream 19731 2705796 ~ 2706821 (+)
G61659 NA non-coding downstream 33819 2766180 ~ 2773104 (+)
G61662 NA non-coding downstream 46981 2779342 ~ 2779910 (+)
G61663 NA non-coding downstream 47719 2780080 ~ 2782479 (+)
G61676 NA non-coding downstream 71070 2803431 ~ 2804747 (+)
G61760 NA non-coding downstream 252429 2984790 ~ 2985087 (+)
CI01000010_00946586_00947327 NA other upstream 1779008 945182 ~ 947577 (+)
CI01000010_00881905_00883563 NA other upstream 1843038 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 1888120 826648 ~ 832705 (+)
CI01000010_03197380_03199958 NA other downstream 461794 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 581334 3313695 ~ 3347796 (+)
G62838 NA other downstream 1157734 3890095 ~ 3893793 (+)
G62856 NA other downstream 1205396 3937757 ~ 3939945 (+)
G62983 NA other downstream 1715811 4448172 ~ 4449327 (+)

Expression


Co-expression Network