kcnj8 (kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834)


Basic Information

Item Value
gene id kcnj8
gene name kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 5658448 ~ 5663281 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229732.3
ACCAGCTGTAATCTTCAAACCAATTCATTGTTTACTAAAAATCATCACCGCctcttatttaaacattttaattgtatttatttatatatttttttttttttttcttattttactaAAAGGTTTACTGCAAAATTTGTACACTGGATTGTACCATTGTACCATTTCCGGTTATTGACTGggcctgaagagcttaaatggcataaaaaataaaaggagaaaTGGGGTTGTTCTAATACGTTTGACCGGTAGtgtcaaatgtttaaatgtttgtggaaccccttttaatgcatttagctattttaagttgcacccattgctgaatacatgtacacatgtacacacacagcttgtctagttcctATATAGAGTCAAGACGTTTAACAGATGAATACTATGGATAACATTATAAATCTAGAAGGAAAATTGAAAAATCAGAATAATACAAAAAGCAGTTCTCTTAAATGACAAAACTGCACTACAGCCGTGATAAATAACATACAGCACGTGGCGACGCGTTCCACaacttttacacttttgcaGAAGTGAGAGGACACATCCTTTCCAGCTGTTTTCACATCTGTCAGGAGGTCTTGGTTGGACAGTAGGTTGGATGAGAACAGAACTCGCTGGAGCTCACAGGCCTCTCCCAGGCAGGGATTTCGCGCCCGCCCATGAGAGGGCCGTCCGTCTGAACCGGGGGGTttgggcagcagcagcagcgccgctgtactcttttctttctgtccAAGAGAAACTTTTTTCCAGCTCGTGCGTAAAGCTGTGCGTAACGCGCCTCGGGCTGGCCGGGACTCGGGTGTAGGATCTTAAAACGCGCCTGTTTCTGGGTGTGAGCTGGAGATTCGCTGTAAAACAGCCCGTAGCGCGTGATCTCTCGCGGCTCCGCAGCGACAGAGACCTCAGAGACAGCGGGGCTGAACTCGGTCCACATGGTGCCGTGTTGGAGAGAGCGCGCGCACCCCTGCCCCTGACCGCGGCCGCATGGATCGCTGCTCGTGAGTAAAGCGCGGGAACAATGCTGGCCAGGAAGAGCATCATCCCGGAGGAGTTCTCCCTGCCGGCGCTCGTGTCGCGGGTCCCCCGCAAGCCCGTGTTCCGGGACCGGGTGAACAAAGCCCGCTTCATCGCCAAGAGCGGCGCGTGTAACCTCGCCCACAAGAACATCCGCGAGCAGGGCCGCTTCCTGCAGGACGTCTTCACCACGCTGGTGGACCTGAAGTGGCGCTTCACCCTGGTCATCTTCACCATGACCTTCCTCTGCAGCTGGCTGCTCTTCGCCATGGGCTGGTGGCTGGTGGCTTTCGCTCACGGGGACCTGGACTCCACCAGACAGGCCGGTATAGAGCAGTGCGTCACCAACGTCAAGTCCTTCACTTCTGCCTTCCTCTTCTCTATTGAGGTGCAGGTCACCATTGGCTTTGGCGGCCGCATGATTACCGAACAGTGCCCAGCCGctatcactgtgctgatcttaCAGAACATTGCAGGCCTCATCATCAATGCCGTCATGTTGGGCTGCATCTTCATGAAGACGGCACAGTCCCACCGTCGtgctgagacactgattttcagCCGCCAGGCCTGCATCGCTGTGCGCAACAACCGCCTTTGCTTCATGATCCGCattggagatctgcgcaagagCATGATCATTGGTGCTGTTGTACGCCTCCAAGTTGTCTGCAAGACTGTCACCCCAGAAGGCGAAGTCATACCCATTCACCAAATTGATGTCCAGACTGAGAGTgctgtggccagcaacagcatCTTCCTCTTGGCTCCCCTCATTATCTGCCACGTCATAGACAAAGACAGCCCCCTGTACGATCTGTCCGCCATGGAGCTGCAGTGCAGCGACCTGGAGGTCATCGTCATCCTAGAAGGTGTGGTGGAGACCACAGGCATCACCACCCAGGCTCGGACATCCTATGTGAGTGAGGAGATCCAGTGGGGTCATCGTTTTGTTCCCATTGTCACAGAAGAGGAGGGTGTTTACTCAGTGGACTACTCCAAGTTCGGAAACACGGTAAAGGTGGCCACGCCGCGGTGTAGTGCACGAGAGCTGGACGAAAAGCCATCCATCCTCATCCAAACGCTACAGAAGAGTGAGCTCTCACATCAGAACTCACTGCGAAAAAGGAACTCCATGCGTCGTAATAACTCTATGCGCAAGAGCAACTCCATGCGGCGTAACAACTTGGCACTGGCTATGCCCAAGGTGCAGTTTCTCGCCCCTGAGGGAGCACTGAATGTGGCAGTCACATGACACGAGGCATGGCTACCCTGGGCCATACTTCTCATTTTAAAAGGTTCATGGGCACTTTCTTCCCCTCTTGCTCTCCTGGGTTTTACCCTGctcctctctgtttctcttgcACGTCTGCCATGATGGAGCAATTGCTAATCTTTTTTATCACCTGTCTGTTCATGATTTGCACAAAATCAacttaaataagaataaataaataaatgtttgacaGTGAGGCAGATGgttctgttgttgttgtttttttttaccatggtcagtaatgttgagcaCTAATGTTGAACATAATTCAAAGGGCTCTAACTAAACCTATTTTATTGTCACTGAAGTATAGGCTATGTATTCTAACAGTTTTTGCACAAATAAGTTTTTGGTAAATATAAGAAATGTAACTATTGTAAagcttaataaagtgttttctgAGA

Function

symbol description
kcnj8 Predicted to enable ATP-activated inward rectifier potassium channel activity. Predicted to be involved in potassium ion import across plasma membrane and regulation of ion transmembrane transport. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Used to study hypertrichotic osteochondrodysplasia Cantu type. Orthologous to human KCNJ8 (potassium inwardly rectifying channel subfamily J member 8).

NR:

description
PREDICTED: ATP-sensitive inward rectifier potassium channel 8

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015272 ATP-activated inward rectifier potassium channel activity molecular_function

KEGG:

id description
K05001 KCNJ8, KIR6.1; potassium inwardly-rectifying channel subfamily J member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229732.3 True 2709 mRNA 0.49 2 5658448 5663281

Neighbor

gene id symbol gene type direction distance location
cmas NA coding downstream 5425 5644509 ~ 5653023 (-)
LOC103037729 LOC108442307,LOC107676911,LOC107583751 coding downstream 163797 5456709 ~ 5494651 (-)
LOC103042505 LOC103042505,LOC108425390,LOC108280006 coding downstream 322049 5314557 ~ 5336399 (-)
LOC103023194 dock4b,LOC108425388,LOC108279862,LOC107656358 coding downstream 458836 5000950 ~ 5199612 (-)
LOC107197701 zgc:101560,LOC108425328,LOC108279438,LOC107656258,LOC107725970,LOC107581287,LOC107658770,LOC107584059 coding downstream 1196923 4447876 ~ 4461525 (-)
abcc9 abcc9,LOC108439416 coding upstream 1620 5664901 ~ 5726283 (-)
nuak1 nuak1,nuak1a,LOC108439414,LOC107587153,LOC107729860,LOC107690659,LOC107582835 coding upstream 433059 6096340 ~ 6119766 (-)
LOC103029290 prl2,LOC108439418,LOC107655571,LOC107725674,LOC107587154,LOC107582933 coding upstream 476681 6139962 ~ 6144208 (-)
LOC111192868 NA coding upstream 1058821 6722102 ~ 6723530 (-)
LOC111192905 NA coding upstream 1071876 6735157 ~ 6736574 (-)
G62150 NA non-coding downstream 128252 5528696 ~ 5530196 (-)
G62147 NA non-coding downstream 131588 5525793 ~ 5526860 (-)
G62127 NA non-coding downstream 206191 5445563 ~ 5452257 (-)
G62125 NA non-coding downstream 208171 5443582 ~ 5450277 (-)
G62121 NA non-coding downstream 226060 5432090 ~ 5432388 (-)
G62210 NA non-coding upstream 67747 5731028 ~ 5732187 (-)
G62217 NA non-coding upstream 96182 5759463 ~ 5761833 (-)
G62237 NA non-coding upstream 265211 5928492 ~ 5967717 (-)
G62244 plxnb2a,LOC108439415,LOC108279839,LOC107587155,LOC107725571 non-coding upstream 284917 5948198 ~ 5950005 (-)
G62272 NA non-coding upstream 350723 6014004 ~ 6015703 (-)
G61942 NA other downstream 1035871 4622213 ~ 4622577 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 1232292 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 1811979 3840601 ~ 3846469 (-)
G61676 NA other downstream 2000180 3650845 ~ 3658268 (-)
mdm1 NA other downstream 2109746 3529520 ~ 3548702 (-)
G62377 NA other upstream 711188 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 969729 6633010 ~ 6695389 (-)
G62484 NA other upstream 1008329 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 1064593 6727874 ~ 6733125 (-)
LOC111192940 NA other upstream 1124061 6787342 ~ 6859670 (-)

Expression


Co-expression Network