slc16a7 (slc16a7,LOC108248566)


Basic Information

Item Value
gene id slc16a7
gene name slc16a7,LOC108248566
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 24230215 ~ 24268449 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229749.3
accgcgcgCGCACCAGGCAcacgtacacaaacacacacacacaccctccccGCGCCCAGCGACGTCACCCTCCCGTCTCGAGAGCGAcaaattaaaacactgtatatataacGCGTCTTCCTGCAACACGGGGCAAGGTCATCGGAGAGGAGCGCGGACACGCCGGCTCTCTGAACGCGGTTCACAAGCAATAAACCGGGGTTTACAATGCCTCCCCCAATTGGACAGCCAACTGTGCCCCCTCCAGATGGAGGTTGGGGCTGGGCTGTAGTGTGTGGAGCCTTCATCTCTATCGGCTTCTCCTATGCCTTCCCTAAAGCCACCACTGTCTTCTTCAAGGACATCCAGAGAATTTTTGATGCATCCTACAGTCAAGTAGCCTGGATCTCCTCTATCATGCTGGCCGTCATGTATGCTGGAGGCCCCATAAGCAGCATACTGGTGAACACATACGGCTCGCGTCCAGTAATGATGGCGGGAGGGGTTCTGTGTTCACTTGGCATGATTGCTGCCTCTTTCTGCACCAGCGTCATACAGCTCTACATCTGCATCGGAGTGATCGGGGGTTTTGGTCTTGCCTTCAACCTTCAGCCAGCACTGACCATGATTGGAAAATACTTTTACAAGAAGCGTCCCATTGCTAATGGCTTTGCCATGGCAGGcagccccgtttttctgagcacacTCGCCCCTCTAAACCAGTACCTTATCAACGCTTTTGGCTGGAGGGGCAGCTTCCTTATTTTAGGGGGGCTTTTGCTGAACTGCTGCGTTGCTGGATCTCTCATGAGACCTCTGCCTCAGCCTCCGAAGAAGGACAAGGACGAGGAAACCGCTGTCGTTCCGGCGACCAAGACGGAGAAGCTCACAGCCTGGGAGACGCTCAACAAATACCTAGACCtttcactttttaaacacagagGCTTCCTCATCTACCTGTCCGGGAATATGATTATGTTCTTAGGGTTCTTTGCCCCCATTGTCTTCCTGTCTCCTTATGCCAAAGATAACGGTGTAGATGAATACTCTGCAGCCTTTCTTCTCTCCATTCTGGCCTTTGTAGACATGTTTGCCCGACCCTCCATGGGCCTGCTAGCAAACTCCCGCTGGGTGCGCCCAAGGATCCAGTATTTCTTCAGCTTTGCAGTTCTTTATAATGGGGTGTGCCATTTACTGTGCCCACTGGCTGAGGGCTACACAGGCATGGTGGTGTACGCTGTGTTCTTTGGGTTTGCTTTTGGCATGGTGAGTGCAGTGCTGTTCGAGACGCTCATGGACCTGGTAGGAGCTCAGAGGTTCTCCAGTGCGGTGGGACTCACTACCATCGTGGAATGCGGCCCTGTGCTGATCGGACCACCGCTGGCAGGGAGATTAGTTGATGTCACTAAAAGCTATAAATACATGTACATCTGCTGCGGGACTGTGGTGATCTTCGCCAGCATCTGGCTCTTCATCGGCAACTTCATCAACTACCGTCTGCTGGAGAAGGAGCGCAAGAAGGAGGAGATGTATAAACGAACTGAGACTGAGGACCCAGACAAGGACAAGGACCGGGCAGAGGCAGAgcctaatacagaaacagatgcTCAGGCTTCAGAGGATCTGTGTGTGAAGGATGAAGAAGCCATGCAGCGGGAAACTAACATTTAGACTTCTTCTGAGACAACGCTGCACTTATACCCGGCCATGTGGCCTCAGCAGGTGAGGAGAGGGTCACACTGAGGTTCACAACCCAAGACTCGACTGCCAAAGCAAACCGTAACTCCTCTGAGGGGTTACTTGGTAGGAAAGACATTAACACTTGTATGTTAGCATtcaattattttatgtaaatcaaGAACTGTGAATGTAGGCCCGTAAGGGTCTGGTGGTGGAGAGAGATGTACCGTGGGCAAAAACCCTGCATTATGTTGTATCATTAGAAACTGTTGATACATGAAGTCTAATAGCACTTAGATTTCTTGTAGCAATACTCTGCAGATCTTGGCTGTactgtttgttttaaattactGATTACCATGGACAgcaattttcacttttttctttgtACTGTTAAAAGAACAGAGAACCTGCTGACTTGAAACCCGTTCATAAAAGAATCATttacaaaataactcaacaaGGAACTAATGAGAGTTCTGCATGGGTTCCATTAGCATTTACATACAGAACTCAGCAGCTTGagtcttctcttttcttttcttggtAGAGAAATGATTGGTCAAAAAGACTGTCTGTGGTAATCAGCTGTACACTTTAGATGAGCCAGATAGATAAtagtatagatagataggattatttattaattcgCTAATTAAAGGAAAATTCCACTGA

Function

symbol description
slc16a7 Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Is expressed in brain; gill; and heart.

NR:

description
PREDICTED: monocarboxylate transporter 2-like

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0015718 monocarboxylic acid transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015355 secondary active monocarboxylate transmembrane transporter activity molecular_function

KEGG:

id description
K08184 SLC16A7; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229749.3 True 2334 mRNA 0.49 5 24230215 24268449

Neighbor

gene id symbol gene type direction distance location
LOC103022829 NA coding downstream 211498 24001682 ~ 24018717 (-)
LOC111193004 NA coding downstream 230715 23995282 ~ 23999500 (-)
LOC103022521 NA coding downstream 237402 23961974 ~ 23992813 (-)
LOC103047861 LOC107575455 coding downstream 323261 23893562 ~ 23906954 (-)
LOC103028371 NA coding downstream 343429 23872673 ~ 23886786 (-)
atp23 atp23,LOC106609469,LOC106576246 coding upstream 93558 24362007 ~ 24367573 (-)
LOC111192881 NA coding upstream 116515 24384964 ~ 24388696 (-)
LOC111192914 NA coding upstream 123562 24392011 ~ 24397445 (-)
LOC103035956 mapk12b,LOC103035956,LOC108442322,LOC108279513,LOC107656379,LOC107579544,LOC107710136,LOC103459704 coding upstream 136715 24405164 ~ 24414312 (-)
LOC103035641 mapk11,LOC103035641,LOC108442323,LOC108279456,LOC107579565,LOC107725929,LOC107656380,LOC107583972,LOC105020226 coding upstream 149050 24417499 ~ 24440903 (-)
G66438 NA non-coding downstream 317742 23911791 ~ 23912473 (-)
G66416 NA non-coding downstream 531788 23698158 ~ 23698427 (-)
G66414 NA non-coding downstream 566246 23602466 ~ 23663969 (-)
G66312 NA non-coding downstream 713632 23508983 ~ 23516583 (-)
G66300 NA non-coding downstream 780429 23449400 ~ 23449786 (-)
G66496 NA non-coding upstream 22139 24290588 ~ 24290790 (-)
G66509 NA non-coding upstream 84852 24353301 ~ 24353703 (-)
G66600 NA non-coding upstream 99664 24368113 ~ 24368356 (-)
G66601 rpap3 non-coding upstream 99989 24368438 ~ 24373280 (-)
G66602 rpap3 non-coding upstream 105452 24373901 ~ 24380582 (-)
dusp16 dusp16 other downstream 1070036 23053273 ~ 23160179 (-)
G66081 bcap29 other downstream 1938533 22290685 ~ 22291682 (-)
G65803 gen1 other downstream 2545387 21629958 ~ 21684828 (-)
ost4 NA other downstream 2656016 21545418 ~ 21574199 (-)
llph llph other downstream 4430613 19795154 ~ 19799602 (-)
G66619 NA other upstream 239385 24507834 ~ 24508281 (-)
G66642 NA other upstream 391575 24660024 ~ 24661902 (-)
LOC103036580 slc25a44,slc25a44a,LOC108432728,LOC108274961,LOC107673271,LOC107727505,LOC107562286,LOC107738649,LOC107680149 other upstream 1248066 25516515 ~ 25530980 (-)
tmem258 NA other upstream 3764252 28032701 ~ 28035961 (-)
LOC103041081 rbpms2,rbpms2a,LOC107381790,LOC103368877,LOC108275203,LOC107560016,LOC107738652,LOC107680137,LOC107086560 other upstream 3852811 28121260 ~ 28132788 (-)

Expression


Co-expression Network