LOC103036771 (LOC103036771,LOC108425308)


Basic Information

Item Value
gene id LOC103036771
gene name LOC103036771,LOC108425308
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 8381497 ~ 8389275 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229828.3
cattaaatgcaTTGAGTTTTGCAATTTCCAAATTTGTTATGCAAGTTTACCTATTGATTTAACAGCAAACTTAACTAAGTGGAACTACATTACATATGGAACAGAGGGGCACTACATTCAGGTACGGTTattgtgtgttgatgtgtgtgcaATGGACATGGAAATACAGAACAAATCGCAAATTTAGTTGCCAAATAAAGGACGATTACGTATTTTATGGGACTGATACAACCCTAcctgaactccagcccaaaatGTTATTAGTTCTCTACCTTTGGCACACGATCCTTCAAGTCTAATGAAAGATAGACATCCACATATTGGTGCATCTCTATCCTGCACCGATATGATGGATCAGACTTCTATTGGGTGGACGAACAGTAGAGTCAATAGCAGTAGAGTTTTCAAACGCAGAAAGATTCATCTATTCAAAGAGTTTCTAAATTAGCACCTTTTCTTCTTGGTGTCTATACAGCCTTGTGTATTTATCAGTGTCTAAGCTTGAATTATCTTTTGATTCTAGCCTCTGCAAACTAGCTAGTGATATATTTTCAAAGTAAACATCTGTATTCTTCCTCCATCTTTAAGGGTTTGATTTCTGTGGAGACGATTTGCTGCATTAGTAGTAAAATGtgctataaataaattaaatttgaatTGATTTAAATAAGACAGCATGGAAATTTGACagtacagaaagaaagagactttGTACCTTTTCCTTTTCCAGTGACCTGAcccacacaaactcacacacactaaacccTGTCATGATTGGTTAGCAGAGTGACCGTGAGCTGAATAAATGCCCCACCAGGTCACCTCTTTTGTGTACCAGGCCGAGGCTGTCAAATAGCCAGGATGATCCGCTCACTGGTTCTGCTGCTGTGTGGGCTGTGCTGTGTTCGAAGCCTGGTGAGGATTCCTCTGACGAAGGCACCGTCTCTGAGGAGCCATTTGAGAGCCAAAAACCAGCTGGAGGACTTTCTGAAGGATCACCAGGTGGATGCATTTTCACGTCGCTATGCCCAGTGCTACCCATCAGCCTTACTGTCCCTCAAGTCGGGCAAAACTGCAGAGAGACTGTACAACTTCATGGATGCTCAGTACTTTGGTCAAATCAGTCTGGGAACGCCAGCACAGAACTTTACAGTGGTGTTTGACACTGGCTCAGCGGACCTGTGGGTGCCCTCCACCTATTGCGTCAGTCCAGCATGTGCTTCACACCACAAGTTCAAGGCCATTGAGTCCAGCACCTACATTCATGATGGTCGAATCTTTGGCATCCATTACGGCTCAGGGCACCTGCTGGGTGTGCTGGCCAAAGACATGCTGAAGGTGGGCTCAGTGACTGTGCAGAATCAGGAGTTTGGGGAGTCTGTGTATGAGCCCGGCATGTCATTCGTCATGACCAAGTTTGATGGAATTTTGGGTCTGAGTTACCCTGCACTCGCCGAGGAGCATGGAGCGCCTGTCTTTGACAATATGATCAAGCAGAACTTGGTGGAGAAGCCcattttctccttctttctcaaCATAGGTCCAGAAAAGGAGGGAGAACTGTTACTGGGAGGTGTGGATGAAGACCTTTTTGTTCCCCCTATTAACTGGGTACCGGTCACTGTAAAAGGCTACTGGCAGATCAAAATGGATGTacTGAAGGTTCAAGGGACCTCTGCATTTTGTCATGGTGATACTTCCAGTTGCCAAGCGATTGTTGACACGGGAACATCTCTGATCGCTGGGCCAACTATGGACATCCTGATCCTTCAGCAGCTTATCGGCGCTACACCAACTCCCGCCGGAGAGTTTCTGGTGGACTGTTCTAGGATCAAGAGTTTGCCTGTCATatcttttgttcttaatggagTGGAGTATTCCCTTCCTGGAGAATCATACATTAGAAAAGATGTAGTGGGTGATAGAGTTTTATGCTTGACTGGCTTTGTAGCAGTAGATATTGTATCTCCAAAAGGGCCGCTGTGGATTCTGGGCGATGTTTTCCTGTCTCAGGTCTACAGTATCTATGACAGGGGTCAGGATCGGGTGGGCTTTGCTCAACTCAAAGTTCCCTCTATTGCTTAAAGATTCTCCAGTGGCTACCATGCCAAGCTATGCATGTCTTCTGTGGGACTGTAGGAGGCATCACTACTGATATGTGCATAATTAAAATCATACCTGCATTTTTGA

Function

NR:

description
cathepsin E-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004190 aspartic-type endopeptidase activity molecular_function

KEGG:

id description
K01382 CTSE; cathepsin E

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229828.3 True 2190 mRNA 0.45 9 8381497 8389275

Neighbor

gene id symbol gene type direction distance location
dgki dgki,LOC108425370 coding downstream 20189 8269640 ~ 8361308 (-)
LOC111192944 NA coding downstream 117748 8253845 ~ 8263749 (-)
LOC103043012 NA coding downstream 128588 8224651 ~ 8252909 (-)
LOC103036167 rassf3,LOC106576047 coding downstream 167423 8175026 ~ 8214074 (-)
LOC103022071 ntf3 coding downstream 391696 7958030 ~ 7989801 (-)
cct2 cct2,tcpb coding upstream 505 8389780 ~ 8400903 (-)
terf2 NA coding upstream 26587 8415862 ~ 8444288 (-)
arfgap3 arfgap3,LOC108279714 coding upstream 58035 8447310 ~ 8462554 (-)
LOC103038884 pacsin2,LOC103038884,LOC108279716 coding upstream 74851 8464126 ~ 8496393 (-)
ttll1 ttll1,LOC102779306 coding upstream 108949 8498224 ~ 8507579 (-)
G62832 NA non-coding downstream 48174 8332508 ~ 8333323 (-)
G62821 NA non-coding downstream 101503 8277685 ~ 8279994 (-)
G62748 NA non-coding downstream 430063 7949835 ~ 7951434 (-)
G62732 NA non-coding downstream 570715 7810553 ~ 7810782 (-)
G62661 tmem209,LOC107583965,LOC107725925,LOC107658886 non-coding downstream 757452 7620926 ~ 7624045 (-)
G62858 NA non-coding upstream 44440 8433715 ~ 8434396 (-)
G62907 NA non-coding upstream 257610 8646885 ~ 8647296 (-)
G62950 NA non-coding upstream 631214 9020489 ~ 9020985 (-)
G63034 NA non-coding upstream 1017130 9406405 ~ 9409548 (-)
LOC103022044 NA non-coding upstream 1025768 9415043 ~ 9418822 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 207681 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 762065 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 1521827 6787342 ~ 6859670 (-)
G62484 NA other downstream 1643549 6671610 ~ 6737948 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other upstream 1229386 9618661 ~ 9622788 (-)
G63217 NA other upstream 1925524 10314799 ~ 10411231 (-)
G63516 NA other upstream 3931280 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 3976193 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 4416696 12805971 ~ 13027498 (-)

Expression


Co-expression Network