LOC103041774


Basic Information

Item Value
gene id LOC103041774
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 8542470 ~ 8553565 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229844.2
acctgcaTACACTgagtgggagaaagagagacagggagggagagagagagagagagatagagagaggaaatGGCGACCGTTTGCCAACATATTTGACCTAGTTTTGAGCAGATCCGCGGAGAGAGCACAGCGCCGTCTGTTTCCACACCAGCAGCTCAGAATCAGAACTACACTCAACATAATAAACCAGAAACTACCACAGGAGATAAATGGCTATGATGTCATCTCAGTGTGATCACGGGGAGCTCGACAGAGGAGAAGAGGATGTAAAGCCGAGGGTTGCGGCCGTCCGGCGGAACCTCTTTGGCCCAGTGGatcaccagcagctccagcaggaCTTCCAGAGGCTGCTCTGCATGAGCATGGAGGTGGCCAAGCAGCGCTGGAACTTCGACTTTCAGAGCGAACGGCCTGCGTCCGGAGCGGTGGAATGGGAGGAGATGCGCTGCCAGGACGTCCCTGCGTTTTACCGCAGCTGTGTGGTGAGGGCAGGGGCGTCCAAATGCAGGCTGGAGTCACAAACACCGGTCAGCAGTGACAGGGGGGCTTTAGTGGCCTCCGTGGCCCAAGAAGAGTACCTGGAGCTGAGGGCCAGTGGAGCATTCAGAGGAGCCAAGctggagaagagaagaaagttAAAGCCACTGGGGGTCAAACACAGACAAGCCACCATCACAGACTTCTTCACTGTAAAGAAGAGGAGGTTTCTTCATCAGAAAGTGTCTTCAAGACAGTGAGCACTAAGGAAAGAGAAAGCTCCACTCATCACTGTGTGCATAGATGTAAATACATAACCTGCAAATGCAGCTTATTATCCAGCAGAGTATCAAAAGCTTTGAATGGactttaaaatgtacagttaaATAACTTCAGTTCAAGTAAGCTTAAAAAAAGACCCACTAACTATATTTCACAAAAACAGAACTTCTCTAAAAGTGGACTGTAAATGTACAGAATGGAcccaaaacaaagaaagaacaaatgtttttttttttttttttttttttcccccacatgACCTCTTCACCTGTTAATTAATGGTCTGGGTTTGGCCTCGTCTGGTCTGGTCTTGCACAAAAAGCTTAATGCCTAAGCTGGGTTTAAAATCTCTCCCCTCTTTATGACAAACAGCAGGGGGTCAAAGATTGACCCCAGTTGCATACCAGGCACACCGACGCCCATTAACCAGAATTTAAAAGGTTAGTCCTGTTGTTTTAGTAGTTTGGTGACATTTGACCTGGGCGTCTAATacaaacattctttaaaaaatacaaaagaaatatTTAGAGACTTACCTTATATACAaattatttgtgtgtatataatttAGGTATTTACACTTTTCCCTATTAAGAGCATATCACCATAGCTAGAGCCcataattgtattgtattttattgtaatgtatttAGTCCCCTATCTCCCTTCAATAAGCTTAAAGTGTTAttaagttgttattattaatttgacCAGAATTATGCCCTTCCTTTTCTTACTCGAATATGTACTCAAAtgtcaattttttaaaaatattttgtattatatggACCAGTTTTCAGTCCGTCCCCCTTggtcagctgaaagagtttgtaAGGAAACAGAGGAGTATAGCCGTTCTGTGTTATTAACAGCAATATCACTTCTAAAACACGCTACCTTAGTTCAACTGTATGAGGTAATTTGTTATGGTATTTGTTCATGTTGTaattatgtagcatttttttctctcatttatttacagtagcttGTCTTTGTGGCTTTTTAAACATGACACTTTTCTATTTGAAGGAATGTAGCATTTTATAATATAGAGTTGATTTAAGTTGATTTAGGTGCAGAATGAAAGATGAAAGCAGATTTGTTTATAAGAGACCTATAAAGTCATGCTCCGCATGTAGATAGCAGGGATGGACCTTCTGCAATACTATTTTTTCTCTGTTGCTGTTCTGTAtgattgcagtgtgtgtgtaggcctgtcacgataattacataatcagattattgtttaatatatggACTTGACCGCAGTAAATTTAGCTGACCCTAATATAACCCATTAGTTTAGGTTTTTTTTGACAATGAGAGCCCAATTAAATTAATGAGTATATcacagaacaacaaaataatCATATTGTAAAACGTTCCCAATTAAACccttgtgcagccctaatattcATATTACAATGTATAAATTACTAATGTAAATGGCTTAATTGCATTATTAGaccaatatattattattatcatcatatcAGAGGTATAAAATTATGATTATGACAGTATATCGTCCAAACAAAGacagttatcgtgacaggcctagcagTGTAACTGCTTTGTGTTTTGCAAGGTTGTATGTGAGTTTggtgttgtgtttattttctacaatttatttgtttttttattttacaaaaggCAGCTGAATTGAATGACCAAAGAGAGGCTTCACATACTGTCAGAAACTAATACACAACTGAGAGATAGCCGTTTGGACTGCTGTCaggaaaaaagaacaaagcCACTCTTAGTTATCCAGCTTCTGAAGCTCACACTAATCTCTGTTCTGGACAGTGGTAATTCCCTCCCATTTTCTGTTGAACACACACTTCTTCCAGTAGCATGCATGGTCACAGCTGGTGCATATGTCCTACAGCAGTTCAGATGTTTTTGTCTTTCTacgaaaaaaaattataatgaacAGATATCCGGTTCATCTACctcaaagaaacaaaaaaaaaaaaacaggtttgcTTTACGACAGGAAGAAGAGAGGCCAAACACtcgtggaggtggaggtgttaCAGATGTTAGAAATACGTGTAAGGTGAAAAGGTGCtgacccaacccactcatcttTATCTGAACTGACTTTTAAAATAAGCAGTTctcaaaaaatacttaaataaatacatttttaaaaaggtgtttttCTATGGTATCCGTCATAGAAGTCTTTTGTAGGACATTTTTGTATGTGACCTTCTGAAATGtcaatatacatttattttgtatcaTATGTTTCCCCAATCTTATTCCGGGAGAACCCCATGCCCTccacatttttgtgttttcctgCTTTAACTTATTGGTCATGTCCCAACTGTAAACTTATTATTGACATTAActagtttttaaatattaaatgtaatatatattatggGTAAAAGTGCCTAAGTGTTGTTATGATGGACACTTAAATTACAATGCACTATAAAACAGAAAGGACATAGGAGGAGCTACATAGAAGGAGCTGCTCAACATTGGTTGAAACGAAAAAATACAGAATGCTGgacaattattttgtttttgcatgttttcaTTTATGTTGGCACTTTTTTATCAATGCAAAATTAAAtaacctaaatatatttttgtcttactttctacttaaaaaaaagaaagtggctAAATATTCAGTTCATCGCCCATCTTTTTGTATACTAGCCTGCCAAGCCTGAACTATTAGAATTAGTATATAGTCTGTACCTTACAGTATTAGGGTATAACATGCACTGGGACTTAACTGTTACCTTCATCTTGAGAagggatcaggtgtgttgggagtGAGGTAAACACTACAATGTGCAGGGAGAGCAGGGGGTCCTACATTATCAGGTGTGGGAAACACTGTTTTAGACCATTCAGAACAATTGGAACAAATTCTGTGTCATATTTCCTTATTATACCACAATTATTTGCTGGGCATGAATCAGTTAATGGAGTGTGTAAAGCCTTACAAAGAGAATGTAATAAGTTTTGGCCTGTGTTTAGAATCTATATCAGATATTATCACCTCTTCACGCCTCTTCACCTTCACACTTTTAAGTACATAACATTCTAAACAAGTAAATTAATAGTAATACACTGCAGGTTTACAAAGATCACCTCACTTTTTTTACACGGTTTAGCAATAGGATAATAGGACCTTCTGAtttgttttgtatgtgtgtgttcaagtGTGTGTTTGAAATTCTATTGCACCCCGTTATTCAttgtgtaaaacatgtaaaaactttttttaacttattgcaatataaattgtatttttttattgttttaaatgtaaattgtcCCTGATTTTACTAACTGGTGTTGTACTAGCTTTGCACtattataaatgttattattgccaTTAAAATGCCTGACGGTGTTGGAGAGCTGCATTAAAAGGTCTGGATGTACATACACGGTCCAGACATGGATATTATGTTAGATTTCAAATCAGATTATTTGAAGAAACTACCTGTCTGTTCAAAAGCGGGTAAGAATTGGCTTATTTCACCATTTTCTCAACAGAAAGTAAAGCACAGTAAATCTTAATCATCCTGAGCCAGAGTCCAGCACCGTGCTTTCCAGCCTTACTTGTCCCAGGTATCTTATCCTAgtattgtaatgctgtatatGCATGAGTGAACGGTAGCCATGTAtacttttataaataatatagtgtaatttaatttgtaattccgctttgttttattatatgggAAGATAATGATTGTGTTTATTACTGAGAACAAAATTATACTTTTGCTTATTCTCTTGATTTGTAATTCCACCAAGTGTTTTCTAGCAGCTTTTTGGTGCACTGTTGTTGTTTCTAACGTTGTGAATTATGTTGCCATAAAtcagaaattataataaaagaTATTGTATGAaaattt

Function

GO:

id name namespace
GO:0009987 cellular process biological_process
GO:0016740 transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229844.2 True 4661 mRNA 0.37 3 8542470 8553565

Neighbor

gene id symbol gene type direction distance location
ttll1 ttll1,LOC102779306 coding downstream 34891 8498224 ~ 8507579 (-)
LOC103038884 pacsin2,LOC103038884,LOC108279716 coding downstream 46077 8464126 ~ 8496393 (-)
arfgap3 arfgap3,LOC108279714 coding downstream 79916 8447310 ~ 8462554 (-)
terf2 NA coding downstream 98182 8415862 ~ 8444288 (-)
cct2 cct2,tcpb coding downstream 141567 8389780 ~ 8400903 (-)
LOC103042080 LOC108425318 coding upstream 33703 8587268 ~ 8590316 (-)
LOC103045460 NA coding upstream 617426 9170991 ~ 9192565 (-)
LOC103042700 LOC108425355,LOC108279935 coding upstream 670149 9223714 ~ 9227248 (-)
nup50 nup50,LOC107699201,LOC107719874,LOC107562145,LOC107601009 coding upstream 698772 9252337 ~ 9266879 (-)
arhgap8 arhgap8 coding upstream 881549 9435114 ~ 9459694 (-)
G62858 NA non-coding downstream 108074 8433715 ~ 8434396 (-)
G62832 NA non-coding downstream 209147 8332508 ~ 8333323 (-)
G62821 NA non-coding downstream 262476 8277685 ~ 8279994 (-)
G62748 NA non-coding downstream 591036 7949835 ~ 7951434 (-)
G62732 NA non-coding downstream 731688 7810553 ~ 7810782 (-)
G62907 NA non-coding upstream 93320 8646885 ~ 8647296 (-)
G62950 NA non-coding upstream 466924 9020489 ~ 9020985 (-)
G63034 NA non-coding upstream 852840 9406405 ~ 9409548 (-)
LOC103022044 NA non-coding upstream 861478 9415043 ~ 9418822 (-)
G63041 NA non-coding upstream 928635 9482200 ~ 9482517 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 368654 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 923038 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 1682800 6787342 ~ 6859670 (-)
G62484 NA other downstream 1804522 6671610 ~ 6737948 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other upstream 1065096 9618661 ~ 9622788 (-)
G63217 NA other upstream 1761234 10314799 ~ 10411231 (-)
G63516 NA other upstream 3766990 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 3811903 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 4252406 12805971 ~ 13027498 (-)

Expression


Co-expression Network