creld2 (creld2)


Basic Information

Item Value
gene id creld2
gene name creld2
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 10394930 ~ 10405872 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007232393.3
TCGGAGCCggaagtgtgcatgtgtgctgGACCCGGCatggagctgtgtgtgtttatgagagCGGAGAGCTGCGGGCTGGAGCAGGGTTACTGATCTTAGCCTGACACTACAGCCTGTCTATGTTGAGTGTTGAGTGTTGAGTGTGGGGCTGTGTATGATGGTGTTGAGGGTGTAGTGGgggggtcagtgtgtgtgtggaaggatGCTGCTCTCTGAAACAGTCAGTCTCCTCTTTTGTCTTATCTTAGTTTTAGCTGCTGGATCTGGCAGCACCAGGGAGCATAAAGATCTGTGCTCAACCTGCAGACAGATCGTGGACAACTTTAACAAGGGCTTTGAGAGAACAGCTAATAAAAACTTCGGTGGTGGGAACACTGCATGGGAGGAaagaaaactgtccaaatatGAGACCAGTGAGATTCGGCTGGTGGAGATCCTGGAGGGCTTGTGTGACAGCGGCAGCTTTGAGTGCAATCACATGGTAGAAGAACATGAGGAGCATTTTGAGACCTGGTGGTTCAAGAGGAAAACGAAACATCCAGACCTGCTGAAATGGTTTTGTATTGAAACAATCAAGGTGTGCTGTCCCAAAGGAACGTTTGGACCAGACTGCAACACATGTGTGGGCGGAGCTGAAAGACCCTGCCATGGTAATGGTAGATGTGATGGTGATGGGACGAGAGGAGGAGATGGGAAGTGCTCGTGTGATGATGGATATGAGGGGGATTTTTGCCTGGACTGTGCTGAGAGATTTTATAATGAGGAGAGGAATGATACCTTTTCTCTGTGTAAAGAGTGTTACCCATCCTGCACGAAATGCTCTGGAGGCACTGCTCAGGACTGTGAGGAGTGCAGGGACGGCTGGGAGGAAGACCAGGAAGGCACATGTGTTGATATCGATGAGTGCTCCAGTGATCCCTTCCCATGCAAAGAGAAGGAGTACTGCCTGAACAATGATGGATCTTATTCGTGCAGTGTGTGTGACAGCAGATGTTCAGGCTGTAAAGGACCAGGGCCTGGGAACTGCCTGGCTTGCTCAGAGGGCTACAAGGACGAGGAGGGCACCTGCACAGACGTGGATGAGTGTGAGCTGCCGGACAAAGTGTGCACTGAGGAACACCAGGAGTGCGTCAATACTAAAGGCAGCTATAAGTGTCTGTGTGAAAGTGGCTTTCAGGAGCAAGATGGAGTCTGTGTTCCACAGCCAGAAACAGAGGAGAGTGAAGAAGAACCTGCATCAGATACTGAAGATTCCCCCACTACCGATAAGGTAACAGAGCGTGAGGACCTGTGACCTGTTCCTGCAGTACTTCTCCTAACCACCAGGGGACAGCAACTCTCCAGCAGAAGTGTGCTCAGAATCACATGGAGCGCACAGCACTTACTGTACATACTCAGCAAACTGCACTTCTGTACCGGCGCAACATGGACagcttattttttatactgtggAAACAGAACAGTGTTTATCCCAAGCACAGCCTCCCACTGCTGCCAAGCGTCTGTCGCCTTCAGGTttttaaacaggctgttttttgtgaattataaTAAAGTCATTCCACTAAAACTCA

Function

symbol description
creld2 Predicted to enable calcium ion binding activity. Predicted to be located in endoplasmic reticulum and extracellular region. Is expressed in several structures, including alar plate midbrain region; digestive system; intestinal bulb primordium; optic tectum; and yolk syncytial layer. Orthologous to human CRELD2 (cysteine rich with EGF like domains 2).

NR:

description
cysteine-rich with EGF-like domain protein 2 isoform X2

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K24335 CRELD; protein disulfide-isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007232393.3 True 1571 mRNA 0.50 10 10394930 10405872

Neighbor

gene id symbol gene type direction distance location
LOC103042295 LOC108425305,LOC105896948,LOC105020256,LOC108279434,LOC105913407 coding downstream 362259 9986304 ~ 10032671 (-)
LOC103036113 LOC108279889 coding downstream 507442 9865360 ~ 9887488 (-)
fbln1 NA coding downstream 530911 9850930 ~ 9864019 (-)
arhgap8 arhgap8 coding downstream 935236 9435114 ~ 9459694 (-)
nup50 nup50,LOC107699201,LOC107719874,LOC107562145,LOC107601009 coding downstream 1128051 9252337 ~ 9266879 (-)
zbed4 zbed4,LOC107735570 coding upstream 18717 10424589 ~ 10433454 (-)
LOC103026034 gramd4,gramd4a,LOC108427081,LOC107721158 coding upstream 1318595 11724467 ~ 11779849 (-)
LOC111192951 LOC108427081 coding upstream 1374683 11780555 ~ 11805577 (-)
LOC103026753 LOC108427079 coding upstream 1418974 11824846 ~ 11965807 (-)
trmu trmu,LOC102792203 coding upstream 1564925 11970797 ~ 11978759 (-)
G63219 pim3 non-coding downstream 80297 10312758 ~ 10314633 (-)
G63190 NA non-coding downstream 200144 10194576 ~ 10194786 (-)
G63189 NA non-coding downstream 207503 10187172 ~ 10187427 (-)
G63183 NA non-coding downstream 259581 10134196 ~ 10135349 (-)
G63175 NA non-coding downstream 298088 10096099 ~ 10096842 (-)
G63247 NA non-coding upstream 158803 10564675 ~ 10565626 (-)
G63248 NA non-coding upstream 184474 10590346 ~ 10590610 (-)
G63255 NA non-coding upstream 224257 10630129 ~ 10630460 (-)
G63259 NA non-coding upstream 252332 10658204 ~ 10658424 (-)
G63265 NA non-coding upstream 1224770 11630642 ~ 11635515 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other downstream 772142 9618661 ~ 9622788 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 2221114 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 2775498 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 3535260 6787342 ~ 6859670 (-)
LOC111192938 NA other downstream 3661805 6727874 ~ 6733125 (-)
G63516 NA other upstream 1914683 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 1959596 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 2400099 12805971 ~ 13027498 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other upstream 3435321 13841193 ~ 13887868 (-)
G64034 NA other upstream 4379449 14785321 ~ 14786149 (-)

Expression


Co-expression Network