CI01000010_03197380_03199958


Basic Information

Item Value
gene id CI01000010_03197380_03199958
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 3197380 ~ 3200044 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_03197380_03199958.mRNA
AGCTGCCAAAAAACAGCCTCCAGAGAGCAGCTCAGGTCAGGGAGAGGTGGAGCAGCAGCAGGATGAAGGAGAGGAGAGGAAGGTATCATGGGCAGGAAGAAGTAGTGATGACTACATCTTCAGCTGCTACAGTATTGGTGATCAGCTTGGGAAAGGTGGTTTTGGTGTGGTGTATGAAGGGAGACGTCTGGCGGATGATCTTAAACTTGATCATCCAAACCCCCTTCCGAAAGAGATCACCCTCAAAAACCTGGCAAATAAAGGTCCCAGCGTGCCAGAGATCATCAGGCTGCTGGACTGGCAGGACCACCCTGACCACTTTGTTATGGTCCTTGAATGTTCCTCTCTCTGTGAGGATCTGGTACAATTTTTGAGGCATCACGGTGGAAGACTCGATGAAGAGAAGGCACGGCATATCATCAGGCAGGTGGCTCATGCTGCGAACATCAAGACATCCGAAGTCAAGCTGATTGACTTCGGATGTGGGGACATCCTGAGGAGTTTGCCGTACAGGTCATTCTCTGGAACAGCACAGTTCTGCCCTCTAGAGTACAATGTGAGGGGAATGTACTACGGCAGGCAGGCGACGACGACGACATGGTCACTAGGGATTCTGATGTTCGTGATGTTGTGCGGACATTTCCCTAGTGACTATGATCTCCTGCTACTGAAACGGAAGCTCTGGTCCAAACCTGGCCTGTCAACAGGTCGTTGCATAAGGCCACTCCAGTTGGTGTCTTTCGTGCAGCTTGGCGTCTTGTGGGCTGCAATGGGAGATGCTTCCATCCCTCCTCTCGCCTTTGCGGGGCGAGCAAGCCATCTGTCCAAATGCCAGAGTTGTCTGTCTCCACAATGTCAGAGCTCCCTTCTCGACCACCTTGCCTGTCAATGCCAGTGCGCCCAGCCATGGCTACCTAGCAAGTCCTGCCACAGGCACCCCAATGGTGTCATTGCCTCCACAGATGTTCCTGCAAAGGCCCCAGCCAAAGCAAGCACCAAAGGCCATCTCAGCCACTCTGGTTTCCAAGCTTCCAGTCTTCTCCGTCCAGGCCAGAGGCCAGAAGTGCCAGTTAGTGCCACCTCAGTGGTTCCGTGGCCATTCGAAAGCCAGAACCCGACTGTCTCAAAAGTGCCAGAGGTTCTTGTTATGGCTGCTACAGAAGGTGCCTCCATGGGCACCCCCATCTCCAAGTTCTCTGCAATGTCACCTCGGTCCCAGAGCTCCCTGCTATGTCTGTCCAACCTCAGAGATTCCTGGTATGGCCACTCGAAAGGTTTCTGCGATGACCAGCTTATGTCTGCTTAGTCCAGTGGGTCCAGTCACTTAGAGGTTCCTGCCACAGCCAGCCCAAGTTCCTTGTCATGGCTGCTTCAGAGCTCTCTGTCTCTGAA

Function

NR:

description
LOC562179 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_03197380_03199958.mRNA False 1392 mRNA 0.53 8 3197380 3200044

Neighbor

gene id symbol gene type direction distance location
CI01000010_03172010_03192359 COLGALT2 coding upstream 4585 3172010 ~ 3192795 (+)
CI01000010_03142808_03164874 CLG10H1ORF21 coding upstream 32123 3140644 ~ 3165257 (+)
CI01000010_03116123_03125761 EDEM3 coding upstream 70771 3116123 ~ 3126609 (+)
CI01000010_03017924_03021246 FAM78BA, FAM78BB, FAM78B coding upstream 174510 3017216 ~ 3022870 (+)
CI01000010_02847074_02911612 NA coding upstream 285768 2847074 ~ 2911612 (+)
CI01000010_03236941_03246548 NA coding downstream 36897 3236941 ~ 3247594 (+)
CI01000010_03250114_03263566 RGL1 coding downstream 49771 3249815 ~ 3264794 (+)
CI01000010_03266931_03270717 NA coding downstream 65553 3265597 ~ 3271117 (+)
CI01000010_03273559_03278060 NA coding downstream 73289 3273333 ~ 3278117 (+)
CI01000010_03283444_03291108 ABHD17AB, ABHD17A, ABHD17AA coding downstream 83400 3283444 ~ 3291628 (+)
G61409 NA non-coding upstream 110364 3055174 ~ 3087016 (+)
G61444 NA non-coding upstream 154898 3031757 ~ 3042482 (+)
G61784 NA non-coding upstream 171928 3023965 ~ 3025452 (+)
G61779 NA non-coding upstream 190068 3007089 ~ 3007312 (+)
G61826 NA non-coding downstream 1595 3201639 ~ 3232879 (+)
G61835 NA non-coding downstream 72750 3272794 ~ 3273005 (+)
CI01000010_03320340_03346243 NA non-coding downstream 133592 3313695 ~ 3347796 (+)
G61847 NA non-coding downstream 239567 3439611 ~ 3439834 (+)
G61860 NA non-coding downstream 370874 3570918 ~ 3571148 (+)
CI01000010_00946586_00947327 NA other upstream 2249836 945182 ~ 947577 (+)
CI01000010_00881905_00883563 NA other upstream 2313866 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 2358948 826648 ~ 832705 (+)
G62838 NA other downstream 690051 3890095 ~ 3893793 (+)
G62856 NA other downstream 737713 3937757 ~ 3939945 (+)
G62983 NA other downstream 1248128 4448172 ~ 4449327 (+)
CI01000010_04640858_04683752 OSBPL9 other downstream 1440797 4640516 ~ 4683778 (+)

Expression


Co-expression Network