kin (kin)


Basic Information

Item Value
gene id kin
gene name kin
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 14080289 ~ 14089552 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007234980.3
GTAGagcgcatacacacacaaacacgaaGCGGCGAGGCagaagaacagaacagaaacgCAGGAACGGGGCTCTGGAACTGTTAACTAGTTTAGTTTAATAGTAAATTAACGCTTTGTTTATAGGTGTGTAGTCAGGGTTGAACATGGGAAAGGCGGATTTCCTGAGCCCTAAAGCGATAGGGAACAGAATTAAAGCTAAAGGGCTGCAGAAGCTGCGCTGGTACTGTCAGATGTGCCAGAAACAGTGTCGAGATGAAAATGGATTTAAATGCCACTGCATGTCCGAGTCCCACCAGAGACAGCTGCTGCTCGCCTCTGAGGATCCCAACCAGTTCATGAGCTACTTCTCAGAGGAGTTTAAGAGTGACTTCCTGGAGCTGCTGAGAAGACGTTTTGgGACGAAGAGAGTCCACAACAACATTGTATATAATGAGTACATTAGTCACCGGGAACACGTTCACATGAACTCCACTCAGTGGGAGACCCTTACAGATTTCACCAAATGGTTGGGGAGAGAAGGGTTTTGTAAAGTGGACGAGACCCCGAAAGGCTGGTATATTCAGTACATCGACCGGGACCCGGAGACCATTCGCAGAcaggaggagctggagaagaagaagaagcaggaTCTGGACGATGAAGAGCGCAGCGCCAAGTTTATCGAAGAGCAAGTGCGGCGAGGCAGAGAGGGCAAAGAGCCAGAGGAAGAGCCGGTGTTCACTGagctgaagagagagagcgaggaggAGAAGGTGGCCTTCAACCTGGGTGGCAGCAGCTCCTCCTCCTTAGGTCCCTCTAAACCAAGTTCATCACTGGGTCCAAGTGCCCTTAAAGCGGCAGCTGCCTCTGTTAAGAGGAAAGACCCCTCCCACAGCTCCGACTCCAAAGACAAGAAGAAGAAATCAGCTCTGGATGAGATCATGGAGATGgaggagcagaagaagaagTCAGTGAGGTCGGATAACTGGTTACGGCCAGACATCGTGGTTAAAGTCATCACCAAGAGACTGGGAGACAAATACCACAAGAAGAAAGCAGTCATTCGGGAGgtgcaaaataaatacacagctgtGGTGAAGATGGTCGACTCAGGGGACAAACTCAAACTGGACCAAAGTCATGTGGAGACGATCATCCCGGCACCAGgtaaGCGAGTGATAATTCTAAATGGACAGTATCGGGATGCAGAGGCCATTCTGGAAGGTATAAACGAGAAAAAATTCTCTGGCACCCTTCTATTAGATTCGGGTCCTATGAAAGGAAAGAGAGTGGAGGGGATTCCATATGAAGATTTCTCCAAGATGGCCTGAGGTGAAGTCAGTCTACTGTACAGCGGTGCTCATTAATCCTGGGACGCCTCTACTGTGTCAGAGCATTCTTCAGggatcttctttttcttttattcttctcTTAAATTTTCATCTTATTTGGTAATAACAATTAAAATGGTGTACAGTCCTTTAATTTGTACTGTAAGAACAATATACGctgtaattacattaattttgaTGGTCAATCGCATATAAAGCACTGTATATGCCAGCTGGCATTATCCATTCCAGTAtccatttaaactttaaactatttttttctatggacaaaaacactttttattttcctgAAAAATTTCTCCTGATTATAACTCTTCCTCTTTTGttccatcaaacacacacacatgtacacccacacacacacgcgcacacacatttatacacacactcagacagggGGAAGGAAGCTGTCAAGGTTAGGGACGATGTAGCTGCTGTAGTGGCCGTCAATGAAGCCTTTCCCGCTGTTGTGGACGAACCAGCAGTACACATCTGACCCGTGCTTCTTATCAAACCGGTAGTCCTTCTGCCAGCCCctgtgtgacacacacacacaatacaatcTTAGGACTCTTATGACAGTCTGACATGAGTTGTGTTGCAGTGTATGTGCTTAATAAAGAGGAAAGTGTATAAATCATTCATATTACGTGGGTAAATAAAGTATGTGAGATTTATACAACA

Function

symbol description
kin Predicted to enable double-stranded DNA binding activity. Predicted to be involved in DNA replication and cellular response to DNA damage stimulus. Predicted to be active in nucleus. Orthologous to human KIN (Kin17 DNA and RNA binding protein).

NR:

description
PREDICTED: DNA/RNA-binding protein KIN17-like isoform X1

GO: NA

KEGG:

id description
K13102 KIN; DNA/RNA-binding protein KIN17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007234980.3 True 2018 mRNA 0.46 11 14080289 14089552

Neighbor

gene id symbol gene type direction distance location
sfmbt2 sfmbt2 coding downstream 82796 13922539 ~ 13997493 (-)
LOC103038708 NA coding downstream 324807 13712234 ~ 13755482 (-)
LOC103026945 LOC108427039 coding downstream 387439 13646396 ~ 13692850 (-)
vezt vezt coding downstream 572995 13474323 ~ 13507294 (-)
LOC103026355 metap2,metap2a,LOC107755160,LOC107689230,LOC107597011 coding downstream 611213 13452956 ~ 13469076 (-)
snd1 snd1,LOC107738807,LOC107732977 coding upstream 1181311 15270863 ~ 15554632 (-)
LOC103045938 LOC108432519 coding upstream 1489322 15578874 ~ 15624348 (-)
akap14 NA coding upstream 1835994 15925546 ~ 15927271 (-)
LOC111192960 NA coding upstream 2258007 16347559 ~ 16351713 (-)
scaf11 NA coding upstream 2341748 16431300 ~ 16450766 (-)
G63904 NA non-coding downstream 88497 13991255 ~ 13991792 (-)
G63852 rbm17,LOC107755150,LOC107748463 non-coding downstream 311238 13764764 ~ 13769051 (-)
G63849 NA non-coding downstream 320286 13758263 ~ 13760003 (-)
G63830 NA non-coding downstream 518195 13561359 ~ 13562094 (-)
G63773 NA non-coding downstream 536721 13542626 ~ 13543568 (-)
G63939 atp5c1,LOC107675979 non-coding upstream 827 14090379 ~ 14093476 (-)
G63947 taf3,LOC107555823,LOC107748456,LOC107675973 non-coding upstream 102136 14191688 ~ 14196509 (-)
G63955 gata3 non-coding upstream 136713 14226265 ~ 14227320 (-)
G63963 NA non-coding upstream 177853 14267405 ~ 14267758 (-)
G63993 NA non-coding upstream 384473 14474025 ~ 14474408 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other downstream 192421 13841193 ~ 13887868 (-)
LOC103025415 iqsec3,LOC107689235 other downstream 1052791 12805971 ~ 13027498 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other downstream 1579626 12365468 ~ 12500663 (-)
G63516 NA other downstream 1699733 12320555 ~ 12380556 (-)
G63217 NA other downstream 3669058 10314799 ~ 10411231 (-)
G64034 NA other upstream 695769 14785321 ~ 14786149 (-)
LOC111192906 NA other upstream 900677 14990229 ~ 14992730 (-)
G64060 NA other upstream 904612 14994164 ~ 14994832 (-)
LOC103027187 NA other upstream 1581754 15671306 ~ 15867795 (-)
G64387 NA other upstream 2495513 16585065 ~ 16585647 (-)

Expression


Co-expression Network