LOC103021355 (LOC103021355,LOC108426405,LOC108279735,LOC107757248,LOC107694301,LOC100694258,LOC107590616)


Basic Information

Item Value
gene id LOC103021355
gene name LOC103021355,LOC108426405,LOC108279735,LOC107757248,LOC107694301,LOC100694258,LOC107590616
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 614113 ~ 621742 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007236107.3
GCTGTTAGCgcgctaagctaagctaacatagCTACAGCTTTCAGGGTTTGACAGCTCGTCAGTGTGACTGGAAAGTTTTACTGGGCGCGCTGAGCACAGCCTTAGCTTAGCTATCCAGCTATCTAAAACTATTTCCTTAGTTAAAAGGTGTTGAGCTGCAGTGTTCCAGTAACTCAGGAGGATGTCTTTCATTTTTAGGTTCTTTCAGAGCACCTTTGATGGAATCTTCGGCCTCATTATGAGGCTTTTGGGCTTTGGGAGAAGACCTGCCATAACCCTTGAGGACCCTAATATCAAGTATGCTTTGCGCCTAATAGATAAAGAGATTATTAGTCATGACACTAGGAAGTTTCGCTTTGCTCTAAAATCCCCAGAGCATGTTTTGGGGCTCCCTGTGGGTCAGCACATTTATCTGTCTGCAAAAATTGATGGTAACCTTGTGGTGAGGCCGTATACTCCAGTGTCCAGCGATGATGATAAGGGCTTTGTGGACCTTGTGGTTAagatatacTACAAAAATACTCATCCGAAGTTCCCTGAAGGTGGCAAGATGTCTCAGTATTTGGACAGTTTACGGATTGGTGACACAATTGACTTCAGAGGGCCAAGCGGCCTGCTAGTTTACCAAGGCAAAGGGAATTGTGCCATCAGACCTGACAAGAAGGCTCCCCCTGAGATTAAGAAAGCAAAACAGATCGGTATGATTGCAGGAGGGACGGGAATTACTCCCATGCTGCAGATCATTCGAGCAATAATGAAGGACCCAAGCGACAAGACAGTTTGCTACTTGCTGTTTGCTAACCAGacagaaaaagacatCCTTCTGCGCCCAGAGCTGGAGGAAATTCAAGCCAATTACCCAGACCGATTCCACCTCTGGTATACCCTTGACAAAGTTCCTGATGAGTGGGAGTACAGCCAAGGCTTCATCAGTGAGCAGATGGTGCGGAGCCACCTCCCTGCCCCTGCCGACGACACGCTCATCCTCATGTGCGGCCCTCCTCCGATGATCCAGTTTGCTTGCAACCCGAACCTGGACAAAGTGGGTCATTCTCCTAGCAGGAGGTTCGCCTTCTAGGCAgcgcatttaaaaaaaaaaaaaaaggtccagCTTTGCCTGATGTCATGACGGTGTTGCCATCTAACTGTATGATTTAAATATTATGCAATCAAAGGATCTCTGGatcaaatgtaaaaatgttgtttgttttttttgctggaaAATGTTCCCTTTAAATGgggattaacaaaaaaaaaaaaaggtccagCTTTGCCTGATGTCATGACGGTGTTGCCATCTAACTGTATGATTTAAATATTATGCAATCAAAGGATCTCTGGatcaaatgtaaaaatgttgtttgtttttttgctggaAAATGTTCCCTTTAAATGGGGattaacaaagaaaagaaagttttttttttttgcacttttgcatgttttgcatATGCTAAATCAGTAGCATTGTAATCTTCTTTTGTATGGCACGTATTTTTTTATCACTAGCAGAATCTTTAAAGAACATGTTCTGCTTATTATATTgagattttttaatataatttgatgATGTAATTTTAAATACTTTGTGCCTTAATGCTTTACCTCATAACATGATACGACATATTGTTCCAAATATGACACTCTAAAGAACCAAGTGGGCTCACTAAAATGTAAACTTGAGCAGCACACCTTGAACACAGTAAAGGTCCGCCCATTCCACAGCAGCGTTTACTTTTTGtgttgaaacattaaaaaatgtttgttacGGTCGCTTACCGTTTTAAACTGCCTAAATACAGTAATCGGTTTTCTGTAAGCATTGTAagctttatcatttttataggTGTCACTGGCAAAGCATGATGTGACAGTCTGTGTTATTGTTGTGTGTTGCACTGGTTTGAGTCTCacaaatgataataataaaaaaaacatatatatgctTCA

Function

NR:

description
NADH-cytochrome b5 reductase 3

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K00326 E1.6.2.2; cytochrome-b5 reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007236107.3 True 1950 mRNA 0.41 9 614113 621742

Neighbor

gene id symbol gene type direction distance location
LOC107197032 NA coding upstream 24008 586693 ~ 590105 (+)
LOC103022716 NA coding upstream 39612 570221 ~ 574501 (+)
LOC111192919 NA coding upstream 48803 559026 ~ 565310 (+)
LOC103031583 NA coding upstream 419269 192192 ~ 194844 (+)
braf braf,LOC107725591 coding upstream 435103 148669 ~ 179010 (+)
syt10 syt10,LOC107744086,LOC107656242,LOC107565666,LOC107592193,LOC107658793 coding downstream 128139 749881 ~ 780797 (+)
LOC111192892 NA coding downstream 187492 809234 ~ 809997 (+)
LOC111192924 NA coding downstream 219295 841037 ~ 844690 (+)
LOC111192895 NA coding downstream 271627 893369 ~ 912312 (+)
LOC111192896 NA coding downstream 291149 912891 ~ 914305 (+)
G60910 NA non-coding upstream 143424 455836 ~ 470689 (+)
G60903 NA non-coding upstream 336791 277010 ~ 277322 (+)
G60996 NA non-coding downstream 118949 740691 ~ 740898 (+)
G61011 NA non-coding downstream 178907 800649 ~ 800870 (+)
G61016 NA non-coding downstream 212245 833987 ~ 835273 (+)
G61023 NA non-coding downstream 219853 841595 ~ 949084 (+)
LOC103039262 NA non-coding downstream 223891 845633 ~ 952485 (+)
LOC103023024 cry1,LOC103023024,LOC108426403,LOC108279922,LOC105900698,LOC107560722 other upstream 55533 539518 ~ 558580 (+)
mrps33 mrps33,LOC106591474,LOC107694294,LOC107725593 other upstream 467339 144189 ~ 146774 (+)
G61014 NA other downstream 184823 806565 ~ 1049056 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other downstream 231784 853526 ~ 1043316 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other downstream 823893 1445635 ~ 1481418 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other downstream 1093075 1714817 ~ 1808930 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other downstream 1299653 1921395 ~ 1935499 (+)

Expression


Co-expression Network