fbln1


Basic Information

Item Value
gene id fbln1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 9850930 ~ 9864019 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007237094.3
GGAGgccagcagtagcagcagagcAGCCAGGAGGAGCAACTCTGACTGGTAGCAATGGGAAACCAGTGGATCACCATAATCCTCACTTTATATGGACTTCATAGAGGAGCTTTTTTAGAACCAGGGGTGGCCAGTGGGCAGACGTCTGTGGAGGCTTGCTGTAGGAATGGGAGAGCCTTTGGTCTGAGCAATCAACACTGCGCTTCCCTTCCTCATATATCCCATCCCTACCCCTGCAGGGTGATTCAGGAgcagtgctgtgatgctgcagTGACAGACAGTCTCTGTGTGAAGGGAATAGAGAGCGCCAGAAGACGAGGAGTGTGTGAGCTCTCATCCTTTCAGGGAGATTCCTGCAAAGTCAAGACATCacagATGTGCTGTGAGTGCTGTACGTTAGGGCTGCTGTCCCGGCGAGATTCAGGACTGTGTGAGCTGCAGATATCTGTCAGTGTGTCCTGCAGGAGTGTGGCCCGGGCCTGCTGTGAGGGGAAACAGCACACTTCTCTCACCCAGGAAACACAAGTATTTCCTGCTCCTGGAAACAAAGATTCTACACGAAGAACCGATTTGTGTGCAGAAGGTGTGACGAGATGCTCTCAGCTGTGTGTTGGGAATGGCTCCTGTGTATGTCTGAAGGGCTACCACCTTAAATCTGATGGTTACACCTGTGAAGATTATAATGAGTGTCTGGCGGGTGTTCATAGCTGTCGGCTGGGGGAGAGGTGCATTAACACTGAGGGCTCTTACCGCTGCCAGAGAGAGGCCAGCTGTGGAACCGGCTACGAGCTGACTGACAGCAACACCTGCAATGatATTGATGAATGTCTGGTAGGAACACATAACTGTGGACCTGGGTTCATGTGCCAGAACACTCCCGGCTCATTCCGCTGCCATCCAAAACAGCAGTGTGCCACGGGCTTTTTGCAGGATGCTGTTGGGAGCTGCATAGATATAAACGAGTGCGTGAGTGAGAACAGCCCGTGCCAGCCCGGGCACTCCTGTATCAACACAGTGGGCTCTTACACCTGCCAGAAGTTTACAGTGATCTGTGGACGAGGATATCACCTTAATAAAGAGGGGACACACTGCTTGGATGTGGATGAGTGCAGTGGGACACATGGACCCTGCCACGGCCACGACTGCGTGAACCTCCTGGGTACCTTCCGCTGCGAGTGCCGCTCTGGCTTTACGTTTAACAGCATTAGCAGAACATGTGACGATACTGATGAGTGCAGAAACTTCCCTGGACGTCTGTGTTCACATAAATGTGAGAACACTCCCGGGTCATTTTACTGCAGCTGCAATCCTGGATTTAGGCTGGACCGGGAGGGCAGGAACTGTGAAGATGTGAACGAATGCGAGAGCAACCCGTGTAGCCAGGAGTGTGCTAACATCTACGGGTCCTATCAGTGCTACTGCCGCCGGGGTTACCAGCTCAGCAATACGGACGGTGTTACATGTGAAGatATCGATGAATGTGCTTTGTCAACTGGGGGCAAAGTTTGCTCCTATCATTGTTTTAATACCCCTGGCAGCTTTCACTGCACCTGCCCTCCAACAGGATACACACTGTCTCACAACGGACGCAACTGCCTGGATATTGATGAGTGTACAACTGGAACACACACCTGCTCAGCAACCCAAAGCTGCTTTAATATACAAGGAGGATTCCGCTGCCTGTCATTCGAGTGTCCGCCCAACTACCAGCGGACAGCAGACAGGCGCTGTGAGCGTTTGCCCTGTGAGCCGAATAGCGAGTGTGTGTCCCTGCCTCTCAGAATCTCCTTCTACAACCTCACCTTCCCCACCAATATCCCCACACCTGCCGCTGTCTTCCGCATGGGCCCGTCCAGCTCCGTCCCCGGGGATGACGTCCAGCTAGCTCTTGTGGACGGTGACGTAGAAGGGTGTTTCACGGTTCAGAAGATGGCTCATGGTGGGGTGATCTCTCTGCAGAGGCCGCTGGCCCAGCCCCGGGACTTCTTGCTCACTGTGGAGATCAGACTGATTCGCTACGGCACCGTGAGCCTGTTTGTGGCCAAGATTGCTGTGTTTGTGGTTAATGAGCATCCCGGTCTGCCCAGGTCAATACCTTAAGTAATGGTCAACAGTATGGAAGCCTATTCCCACCACctaacataaaaaatgtattaaagtgaatattaagtaaattgctatCTAATTTTGAGATAGCATGTCAACATAATGCCTTACTATCTCAAGGGAATGAGATAGCATCCAAAATAACAAGTTAGTATCtgaaaataacaacttagtatctcaaaa
>XM_015602383.2
GGAGgccagcagtagcagcagagcAGCCAGGAGGAGCAACTCTGACTGGTAGCAATGGGAAACCAGTGGATCACCATAATCCTCACTTTATATGGACTTCATAGAGGAGCTTTTTTAGAACCAGGGGTGGCCAGTGGGCAGACGTCTGTGGAGGCTTGCTGTAGGAATGGGAGAGCCTTTGGTCTGAGCAATCAACACTGCGCTTCCCTTCCTCATATATCCCATCCCTACCCCTGCAGGGTGATTCAGGAgcagtgctgtgatgctgcagTGACAGACAGTCTCTGTGTGAAGGGAATAGAGAGCGCCAGAAGACGAGGAGTGTGTGAGCTCTCATCCTTTCAGGGAGATTCCTGCAAAGTCAAGACATCacagATGTGCTGTGAGTGCTGTACGTTAGGGCTGCTGTCCCGGCGAGATTCAGGACTGTGTGAGCTGCAGATATCTGTCAGTGTGTCCTGCAGGAGTGTGGCCCGGGCCTGCTGTGAGGGGAAACAGCACACTTCTCTCACCCAGGAAACACAAGTATTTCCTGCTCCTGGAAACAAAGATTCTACACGAAGAACCGATTTGTGTGCAGGTGTGACGAGATGCTCTCAGCTGTGTGTTGGGAATGGCTCCTGTGTATGTCTGAAGGGCTACCACCTTAAATCTGATGGTTACACCTGTGAAGATTATAATGAGTGTCTGGCGGGTGTTCATAGCTGTCGGCTGGGGGAGAGGTGCATTAACACTGAGGGCTCTTACCGCTGCCAGAGAGAGGCCAGCTGTGGAACCGGCTACGAGCTGACTGACAGCAACACCTGCAATGatATTGATGAATGTCTGGTAGGAACACATAACTGTGGACCTGGGTTCATGTGCCAGAACACTCCCGGCTCATTCCGCTGCCATCCAAAACAGCAGTGTGCCACGGGCTTTTTGCAGGATGCTGTTGGGAGCTGCATAGATATAAACGAGTGCGTGAGTGAGAACAGCCCGTGCCAGCCCGGGCACTCCTGTATCAACACAGTGGGCTCTTACACCTGCCAGAAGTTTACAGTGATCTGTGGACGAGGATATCACCTTAATAAAGAGGGGACACACTGCTTGGATGTGGATGAGTGCAGTGGGACACATGGACCCTGCCACGGCCACGACTGCGTGAACCTCCTGGGTACCTTCCGCTGCGAGTGCCGCTCTGGCTTTACGTTTAACAGCATTAGCAGAACATGTGACGATACTGATGAGTGCAGAAACTTCCCTGGACGTCTGTGTTCACATAAATGTGAGAACACTCCCGGGTCATTTTACTGCAGCTGCAATCCTGGATTTAGGCTGGACCGGGAGGGCAGGAACTGTGAAGATGTGAACGAATGCGAGAGCAACCCGTGTAGCCAGGAGTGTGCTAACATCTACGGGTCCTATCAGTGCTACTGCCGCCGGGGTTACCAGCTCAGCAATACGGACGGTGTTACATGTGAAGatATCGATGAATGTGCTTTGTCAACTGGGGGCAAAGTTTGCTCCTATCATTGTTTTAATACCCCTGGCAGCTTTCACTGCACCTGCCCTCCAACAGGATACACACTGTCTCACAACGGACGCAACTGCCTGGATATTGATGAGTGTACAACTGGAACACACACCTGCTCAGCAACCCAAAGCTGCTTTAATATACAAGGAGGATTCCGCTGCCTGTCATTCGAGTGTCCGCCCAACTACCAGCGGACAGCAGACAGGCGCTGTGAGCGTTTGCCCTGTGAGCCGAATAGCGAGTGTGTGTCCCTGCCTCTCAGAATCTCCTTCTACAACCTCACCTTCCCCACCAATATCCCCACACCTGCCGCTGTCTTCCGCATGGGCCCGTCCAGCTCCGTCCCCGGGGATGACGTCCAGCTAGCTCTTGTGGACGGTGACGTAGAAGGGTGTTTCACGGTTCAGAAGATGGCTCATGGTGGGGTGATCTCTCTGCAGAGGCCGCTGGCCCAGCCCCGGGACTTCTTGCTCACTGTGGAGATCAGACTGATTCGCTACGGCACCGTGAGCCTGTTTGTGGCCAAGATTGCTGTGTTTGTGGTTAATGAGCATCCCGGTCTGCCCAGGTCAATACCTTAAGTAATGGTCAACAGTATGGAAGCCTATTCCCACCACctaacataaaaaatgtattaaagtgaatattaagtaaattgctatCTAATTTTGAGATAGCATGTCAACATAATGCCTTACTATCTCAAGGGAATGAGATAGCATCCAAAATAACAAGTTAGTATCtgaaaataacaacttagtatctcaaaa

Function

NR:

description
fibulin-1-like

GO: NA

KEGG:

id description
K17307 FBLN1_2; fibulin 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007237094.3 True 2289 mRNA 0.51 15 9850930 9864019
XM_015602383.2 False 2286 mRNA 0.51 15 9850930 9864019

Neighbor

gene id symbol gene type direction distance location
arhgap8 arhgap8 coding downstream 391236 9435114 ~ 9459694 (-)
nup50 nup50,LOC107699201,LOC107719874,LOC107562145,LOC107601009 coding downstream 584051 9252337 ~ 9266879 (-)
LOC103042700 LOC108425355,LOC108279935 coding downstream 623682 9223714 ~ 9227248 (-)
LOC103045460 NA coding downstream 658365 9170991 ~ 9192565 (-)
LOC103042080 LOC108425318 coding downstream 1260614 8587268 ~ 8590316 (-)
LOC103036113 LOC108279889 coding upstream 1341 9865360 ~ 9887488 (-)
LOC103042295 LOC108425305,LOC105896948,LOC105020256,LOC108279434,LOC105913407 coding upstream 122285 9986304 ~ 10032671 (-)
creld2 creld2 coding upstream 530911 10394930 ~ 10405872 (-)
zbed4 zbed4,LOC107735570 coding upstream 560570 10424589 ~ 10433454 (-)
LOC103026034 gramd4,gramd4a,LOC108427081,LOC107721158 coding upstream 1860448 11724467 ~ 11779849 (-)
G63107 NA non-coding downstream 200742 9647552 ~ 9650188 (-)
G63105 NA non-coding downstream 208690 9637688 ~ 9642240 (-)
G63042 NA non-coding downstream 364697 9486022 ~ 9486233 (-)
G63041 NA non-coding downstream 368413 9482200 ~ 9482517 (-)
LOC103022044 NA non-coding downstream 432108 9415043 ~ 9418822 (-)
G63125 NA non-coding upstream 26997 9891016 ~ 9891758 (-)
G63131 kdm5a non-coding upstream 43534 9907553 ~ 9909248 (-)
G63136 NA non-coding upstream 50546 9914565 ~ 9916622 (-)
G63169 NA non-coding upstream 209539 10073558 ~ 10074137 (-)
G63170 NA non-coding upstream 210210 10074229 ~ 10074477 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other downstream 228142 9618661 ~ 9622788 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 1677114 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 2231498 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 2991260 6787342 ~ 6859670 (-)
G62484 NA other downstream 3112982 6671610 ~ 6737948 (-)
G63217 NA other upstream 450780 10314799 ~ 10411231 (-)
G63516 NA other upstream 2456536 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 2501449 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 2941952 12805971 ~ 13027498 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other upstream 3977174 13841193 ~ 13887868 (-)

Expression


Co-expression Network