bcap29 (bcap29)


Basic Information

Item Value
gene id bcap29
gene name bcap29
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 22284747 ~ 22297679 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007238163.3
ATCCGGCACAACACCGGTCCGTGTAGTTGAGACAGCGCAGTGACGTCAGGACTGTGAGACGGTAGAGGCAGAAGTTGTAAAGTTTTCCAGATTTCGCTCTGACCGCGCTGATGTGAAGCTGAGCCGCAGACAGCATTCTGCAGGCTTAAAATGACTTTGCAGTGGACTGCAGTTGCTTCATTCCTCTATGCTGAAATTGGAATCCTTGTCTTCCTCTGTCTGCCGTTCATCTCAGCTAAAAGATGGCAATCTATATTCAAACTGAACATGTGGAGCAGCATTGCTCGATTCTGGAACAAGGGATTCCTGGCAATGATAATCatccttattgttctttttctggaTGCTGTAAGGGAGGTTAGAAAATACTCTGGAGCTGAACCCAGCAAAGAAGCCAAAATGACACCTAACATGGTTGACCACTTGCATATGAAGCTTTTCAGAGCCCAGAGGAATCTCTATATCTCTGGCTTCTCCCTCTTCTTGTGGCTGGTCTTGCGCCGGGTGATCATGCTGATAAATCAGCTGGCAGAGGTTACAGACACCAGCAAAGCTCTTCATGCCCAGACAGAGGCAGCTAACCTGGCTGCCAAAAAGTACATGGAGGACATTGAATTGCTCAAGCagGCTTTGGTAGATGGCACAGAAGAGGAAAAGAGTGGACAAAAGAATGAACTTCTTAGAAAAGAGGTGCAGAAACTAACAGATGAGTTGAAGACATCTACTGAAGCCCTGCAGAAGTCCAGATCAGAAGTAGATGTCCTTAAGAAGCAGACAGAAGACCTGGCCAAAGAATATGACCGTTTACTCCAGGACCACCAGCAACTACTGAATCAAAGTGAAGATAAGAAAGATATGTAAGCAAACCACTCATCAGCTTCGAACAGCTCTAGACAGCATGGCTCCACCCTATTCACACTTGGATTCACCACATAGCAATACACACAGTAATTTGGACATATTCTATTTGTACTGTTTCAATGATAATTTAGTAAAAGATCAGAGACTTGACCAGTTTGAGACGTTTAAATATATGAATGAATGTGGTTGGATATTATTAAGTTTACACTATCTACATGTTGTTAAGTTTAGAAATGTTAATAACATTAAGTTGaattttaatatacagtgattTAATATAGTcacttgttttaaaatattttgtttttaaagcaaaGCAGTGTTGTTCTCTAGACATGCAAAAGTCTTCCTTATTTTGACAGAGTTTACTAGATAATAACATGTATTGTTATTAACTAGTCAAAAAATATGCTGGATAAGATTTGATTTGttatgcatttataagtgaATGTCACTTTCATACACGTTGGTTTCATCagctttttgttcttttttaaatgagCAGTGATTGTACTTGTGCCAAAGTGAAATTAAACCAAATGGATTTTGTTCACTCTTA
>XM_007238164.3
ATCCGGCACAACACCGGTCCGTGTAGTTGAGACAGCGCAGTGACGTCAGGACTGTGAGACGGTAGAGGCAGAAGTTGTAAAGTTTTCCAGATTTCGCTCTGACCGCGCTGATGTGAAGCTGAGCCGCAGACAGGTGAGTACAGGGACTTCTGCTGCTGTCACAGTAGAACAGGCCGCTGCGGGGCGGGAATCCGCTGCTAGAACAGCCAACCTACCCACCTCAGCTCTCTCAGTCCACAGCAGGCATTCTGCAGGCTTAAAATGACTTTGCAGTGGACTGCAGTTGCTTCATTCCTCTATGCTGAAATTGGAATCCTTGTCTTCCTCTGTCTGCCGTTCATCTCAGCTAAAAGATGGCAATCTATATTCAAACTGAACATGTGGAGCAGCATTGCTCGATTCTGGAACAAGGGATTCCTGGCAATGATAATCatccttattgttctttttctggaTGCTGTAAGGGAGGTTAGAAAATACTCTGGAGCTGAACCCAGCAAAGAAGCCAAAATGACACCTAACATGGTTGACCACTTGCATATGAAGCTTTTCAGAGCCCAGAGGAATCTCTATATCTCTGGCTTCTCCCTCTTCTTGTGGCTGGTCTTGCGCCGGGTGATCATGCTGATAAATCAGCTGGCAGAGGTTACAGACACCAGCAAAGCTCTTCATGCCCAGACAGAGGCAGCTAACCTGGCTGCCAAAAAGTACATGGAGGACATTGAATTGCTCAAGCagGCTTTGGTAGATGGCACAGAAGAGGAAAAGAGTGGACAAAAGAATGAACTTCTTAGAAAAGAGGTGCAGAAACTAACAGATGAGTTGAAGACATCTACTGAAGCCCTGCAGAAGTCCAGATCAGAAGTAGATGTCCTTAAGAAGCAGACAGAAGACCTGGCCAAAGAATATGACCGTTTACTCCAGGACCACCAGCAACTACTGAATCAAAGTGAAGATAAGAAAGATATGTAAGCAAACCACTCATCAGCTTCGAACAGCTCTAGACAGCATGGCTCCACCCTATTCACACTTGGATTCACCACATAGCAATACACACAGTAATTTGGACATATTCTATTTGTACTGTTTCAATGATAATTTAGTAAAAGATCAGAGACTTGACCAGTTTGAGACGTTTAAATATATGAATGAATGTGGTTGGATATTATTAAGTTTACACTATCTACATGTTGTTAAGTTTAGAAATGTTAATAACATTAAGTTGaattttaatatacagtgattTAATATAGTcacttgttttaaaatattttgtttttaaagcaaaGCAGTGTTGTTCTCTAGACATGCAAAAGTCTTCCTTATTTTGACAGAGTTTACTAGATAATAACATGTATTGTTATTAACTAGTCAAAAAATATGCTGGATAAGATTTGATTTGttatgcatttataagtgaATGTCACTTTCATACACGTTGGTTTCATCagctttttgttcttttttaaatgagCAGTGATTGTACTTGTGCCAAAGTGAAATTAAACCAAATGGATTTTGTTCACTCTTA

Function

symbol description
bcap29 Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and protein localization to endoplasmic reticulum exit site. Predicted to act upstream of or within intracellular protein transport and vesicle-mediated transport. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human BCAP29 (B cell receptor associated protein 29).

NR:

description
B-cell receptor-associated protein 29-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007238163.3 False 1420 mRNA 0.40 8 22284747 22297679
XM_007238164.3 True 1531 mRNA 0.41 8 22284747 22297679

Neighbor

gene id symbol gene type direction distance location
dus4l dus4l coding upstream 6725 22274641 ~ 22278022 (+)
LOC103044887 LOC103044887,LOC108435120,LOC108279510,LOC101474374,LOC100702227,LOC108233439 coding upstream 40843 22181203 ~ 22243904 (+)
LOC103042836 NA coding upstream 122897 22104840 ~ 22161850 (+)
ptprr ptprr coding upstream 184111 21994110 ~ 22100636 (+)
rab21 rab21,zgc:154045,LOC106609839,LOC107687573,LOC107690748 coding upstream 328469 21932769 ~ 21956278 (+)
LOC103025638 mansc1 coding downstream 707076 23004755 ~ 23012773 (+)
lrp6 lrp6,LOC100705426 coding downstream 722705 23020384 ~ 23085044 (+)
rerg rerg,LOC107662225,LOC107669035 coding downstream 1153884 23451563 ~ 23548257 (+)
etv6 etv6 coding downstream 1618627 23916306 ~ 23953720 (+)
LOC103023565 fam19a2,LOC103023565,LOC108411383,LOC108248567,LOC106529719,LOC103364248 coding downstream 1728782 24026461 ~ 24117713 (+)
G66056 NA non-coding upstream 675 22283434 ~ 22284072 (+)
G66055 NA non-coding upstream 3256 22280774 ~ 22281491 (+)
G66053 NA non-coding upstream 4753 22279748 ~ 22279994 (+)
G66048 NA non-coding upstream 6016 22278428 ~ 22278731 (+)
G65993 NA non-coding upstream 155419 22127389 ~ 22129328 (+)
G66062 NA non-coding downstream 21164 22318843 ~ 22319548 (+)
G66140 NA non-coding downstream 656598 22954277 ~ 22955434 (+)
G66144 NA non-coding downstream 660762 22958441 ~ 22962842 (+)
G66143 NA non-coding downstream 666192 22963871 ~ 22969303 (+)
G66183 NA non-coding downstream 810207 23107886 ~ 23204707 (+)
gen1 gen1 other upstream 569310 21629787 ~ 21715437 (+)
agbl5 NA other upstream 735585 21440409 ~ 21549162 (+)
G65575 nav3 other upstream 1260173 21024175 ~ 21024574 (+)
G65565 NA other upstream 1327112 20957135 ~ 20957635 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other upstream 2490422 19780663 ~ 19794325 (+)
ccdc167 NA other downstream 641876 22939555 ~ 22949199 (+)
c7h11orf98 cunh11orf98,c19h11orf98 other downstream 701691 22999370 ~ 23003468 (+)
crebl2 crebl2,LOC107707978 other downstream 833401 23131080 ~ 23138011 (+)
eps8 eps8 other downstream 924835 23222514 ~ 23323361 (+)
G66296 NA other downstream 1146495 23444174 ~ 23444677 (+)

Expression


Co-expression Network