amn


Basic Information

Item Value
gene id amn
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17804284 ~ 17805826 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007242882.2
CATTTACTCTGATTTACTGACCAACCAAAGTTCACTCTGCTCACTTTCTACCGCTGTTCCTTCCCTCGTCAGGATGCCGACCGCACCGGCTCTCgttcctctgtttctctgtgttctcGGATCTGTTGGGGGCGTCTACAAGCAGTGGATCCCTGACACCAACTTCGAGAACGCGACGAACTGGGATAAAGGTTCTGTTCCGTGTGGGAGCGACCAGGCGGTGTTCCCGGCTCAGGGTAAAGTGGCGGTCTACGTGGGATTGGTTCATACGCTGGCTGGGTTGAGTCTACCGGTGGACGGGGAGTTCGTTCTCGCGCCAGGAGCCGGGTTTTCCATAAGAGTGGGTCAAGACCCTGGTTGTGGAGCTGGTGGTACCACCCAGTTTAAAGACGTTGAGTCGCTAAAGTGGTTCGATCCAGATCTTTGGAGCGCCGCTTCATCGGTAGACGACTTCCAGAAAGGTTCGTACCTTTTCTTTGTGCATGAGGAGAGCGTGCCGTGTCAATACGATGATGTCTTGTTTCGAGATGCTTCttcattccgtgttgatgtatcAGGGAACACCAATACCGTTCCCGTCAAGAGCGTTAAAGTTCTTGGACAACGGTTTGAAAGCAACTCGGAATTCTCCCAGTATTTGACATCCAGTCTTGGAAAACTCCAATTCCATGGATCTTCCTCCATCAAAGTTGAAGGATCAAGCTGCACAGATGTTACCGGCTGCGAATGCGGAAACTCCGCCAACCACGAACGGATCTGCGCCAACGTAGCATGTTCACAGCAGCTGGACTGCAAGAAACCCCTTCGCCCAGTTGGGCACTGTTGCGACGTTTGCGGCACCATCATGGACATTCAATTCTCCGGCAGCTTCAACCTGGACTCGTACCGCCAACGCCTGCAGCACCTCTTCCTCGCTCTACCGAAGTACAAATCCGTTCAACTGGCGGCGTCAAAGGTGTCGAAAACACAGAAGATGCTGGGAATAatcccgtatcaatcaacccaCGAGATCCAGGTGGTCCTGTTGGACCAGAACACGGGTTCTGAGGCTGGCATGTTATCCGAAGCTCTCGCTCGAGACATTCTGAAGGACGTCCACGACCAAGGCGCCCACCTGGGCATCGAGAGCGCAGACTTCCGTGCCTCTTCAGGCGCCACTGGCAGCGATGTTTCTGGCCTGGGCGATGGAGACGTGGCTGGGATTGTTCTGGGTGTTCTAGCCTTGGTGGTGTTCTCAGTCCTGCTGGTGGTGGCCTACAGGAAAGGTCTGCTGCCCAGGATGCCACGTTTACCACGTCTGCCGTCGTTCAGCAGCTGGAAGAAGGACAGTGGAGAGGTGGGAGAACTCGGAGGACCCATAGACCACGGATTTGATAACCCCATGTTCGAGAAGCCGCACGCCTTGCCGGAAATCTCTGGACTGTACGGAGCAGAGAGTCTGAACGGCATTACCTTAACTCACTCAGGTGTTCACTTTGTCAATCCTGTGTATGATGAAACTGATTTCAGtgcatgaaattaaatgtacaaGCAATGACAGATA

Function

NR:

description
PREDICTED: protein amnionless-like

GO: NA

KEGG:

id description
K18259 AMN; protein amnionless

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007242882.2 True 1543 mRNA 0.53 1 17804284 17805826

Neighbor

gene id symbol gene type direction distance location
LOC111192968 NA coding upstream 23692 17768928 ~ 17780592 (+)
LOC111192970 LOC108437139 coding upstream 40163 17748628 ~ 17764121 (+)
LOC107197389 NA coding upstream 58511 17732094 ~ 17745773 (+)
LOC111192980 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding upstream 84426 17707970 ~ 17719858 (+)
LOC111192975 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding upstream 101369 17690206 ~ 17702915 (+)
otop2 otop2 coding downstream 54391 17860217 ~ 17879272 (+)
LOC111192979 NA coding downstream 118520 17924346 ~ 17929849 (+)
LOC103040205 NA coding downstream 179139 17984965 ~ 18132010 (+)
LOC103030006 LOC108437142,LOC105936201,LOC103140951,LOC107083146,LOC103468841,LOC102223636,LOC105899306,LOC105012845 coding downstream 355246 18161072 ~ 18172237 (+)
LOC107197388 NA coding downstream 370401 18176227 ~ 18193170 (+)
G64595 NA non-coding upstream 125842 17677928 ~ 17678442 (+)
G64586 NA non-coding upstream 130123 17622861 ~ 17674161 (+)
G64579 NA non-coding upstream 181612 17565712 ~ 17622672 (+)
G64583 NA non-coding upstream 208155 17588922 ~ 17596129 (+)
G64580 NA non-coding upstream 238827 17562563 ~ 17565457 (+)
G64753 NA non-coding downstream 151787 17957613 ~ 18008671 (+)
G64754 NA non-coding downstream 166753 17972579 ~ 18061330 (+)
G64760 NA non-coding downstream 193549 17999375 ~ 18000064 (+)
G64763 NA non-coding downstream 201328 18007154 ~ 18008138 (+)
G64764 NA non-coding downstream 206655 18012481 ~ 18348193 (+)
G64698 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 other upstream 84372 17690209 ~ 17719912 (+)
LOC103030423 pcyt2,LOC108437168,LOC108277112,LOC107701914,LOC105013038,LOC107576708,LOC107729574,LOC106601930 other upstream 916089 16833290 ~ 16888195 (+)
G64449 NA other upstream 928343 16873087 ~ 16875941 (+)
G64431 NA other upstream 1050724 16753043 ~ 16753560 (+)
G64289 NA other upstream 1361835 16439220 ~ 16442449 (+)
G64990 si:dkey-282h22.5,LOC108261121 other downstream 750302 18556128 ~ 18623499 (+)
LOC103045528 NA other downstream 1417383 19223209 ~ 19278071 (+)
LOC103044219 mcrip1,fam195b,LOC107654575 other downstream 1470976 19276802 ~ 19279517 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other downstream 1474466 19280292 ~ 19340879 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other downstream 1974837 19780663 ~ 19794325 (+)

Expression


Co-expression Network