mdfic (mdfic)


Basic Information

Item Value
gene id mdfic
gene name mdfic
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 7139851 ~ 7170640 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007252716.3
TTTCAGTTCAACTTTCTTTAGAGGGGAGAGAAGCAGCGAGAAGGAGCTGCCTGCCTTCAAACTGGGAACTGGACGTACTGGAGTTACTGGACATTCTTACagtagtttaatagtttaaaactCATCTCTGATGACTGTGCTTGTTTTTTCTAACCTCTGGTTTTAGCTGTAGTTTAGCGGGAAGTGAGAAACTCGGGACTGAAGATGGGGAGATAGCCTGGAGACGGAGCTGACATGTTTGAGAGGGTCGACGGCTGAGTCAATAAGGAGGCTCTCTTCTGTTGTTTTCTAGCTGACAAACTAGCAAACACAGTCCAACAAGAAGGCTGGCTCATGTCCGCGGAGACGGTCTTACCTCCGGAGGGGCCTGCAGGGCCAGagcaggagctgcagcagcaggagaCCAGGCTGCTTCTGGATAACTCCCATGacacgtgtacaaatgaaaataatgaaTCATCTGCGACTGCAGACACAGCCAGAATTCCAGCTTCCAGGGAACATTCGGCTGATGAACAGGGCGATGTTTTAGAGGAAAACCACACTCATGGCGACCTTGTAAGAAccCAACCTCAGCCACTGGCTAAGCCTCACCCAGCAGCATGTCTACAGCAGCCCAGTGAGGGAGAGGGTGCCAGGCTGCACAATGGCCTTCATGCAGGGCTGAGTAATGGACACAGAATGCCCCGCGGGGGCACACAGCCTGCAGCTGCTGCCACCGCCGCCGCTGCTTCTTCGTCTGAGAGCAGAAAGCATCCGTCTCCTGTCTCTCAGCGCatgcagaagaagctccgcTCCAGCCTGTCCGTCAACAGcgacagcagcaggaggagcaaAGGCAGCTCCACTGGTTCACACAAACCTGGCTCCTCTCCAGAGGACTGCTGTGTTCATTGCATCCTGGCCTGCCTTTTCTGCGAGTTCCTCACCCTTTGTAACATGGTGGTGGCTCAGGCGTCCTGTGGCACCTGCACTTCGGAggcatgctgctgctgctgctgcgcagATGACCTGGGAGATGACTGCAACTGCCCCTGCGACATGGACTGTGGCATCATGGATGCCTGCTGCGAGTCGTCCGACTGCCTGGAGATCTGTATGGAGTGCTGCGGAATCTGCTTCCCCACATAAGGCTCTGATCACCTACAGCCAGAGCAGACAATGAGACAGAccaaagagggagagagaatgtACATAGATACctgtatgtatttgtatttgtatgtttgtatgtctgttttgtatgtgtgtgtctttgtatgTATGAGGGCTTCACATTTTTCTCCAGTGGAAAAATGCGCCTCTGGACTTAATCAAGTTGGTTAAGCTGACGCTTTCCAGACTGAAAAAGACAATTACATATTCATGTAGAGGacaatgtaaaatacatttattgttctgttttgtCGAGACGTGTCAAATATGCTAATAACTCTTTTACTTAAAGTATTATAGAGTCTTTCCTTTAACTGTCATTTTATACATATTGTTTCCATAATTTCATCCTTTTTCAGAGGTCCTTACGTcttattgaatctagttttttAATACAGTCAGATTTGCGGAATGCAGATGTTCTTAGCCTACAAGGGCAGGCTTCAAATGAGTTTGGTCTGCCCTGAACAACACTGTAATTTCCACAGAGGCATGACTTTTTCACACTGTCAGACGTCAAAGCTTTGTGGGTGTTATATGGGAGTCTTATTTTGGACTTGCTGAAAattacttgttttttctttttctttttttttttaactgaaggtCTGTTTGGTAGGGCCTCCTCTAAGCACTGTCTACTGTAGCTTGCTTTATTACAGggccataaagttttaaaatgagttttccATAAAACTGACAATGAAATGATGGAAAACCGTAACAAACATTTGTGAATGTTGGCATGTAAATACATCTTGGATCTAGTCAATCAAATGTCTGTAAgaatattttacagtaatacAGCTGATTTCAGCATttgtatttaacttttttatttttattggttttaaccaataaatttaaCCAATAAGGAACAACAAAGAACATGAGTTAACAGACTCTTGGCTGCAGCCAAAGTAAGCTGCATTTTTGTGCTGCAACATCATAGAAGGCTGTTTCAAATTGAAGACCCCTTTGTATACAGCCAAGAAATGCAGCTTACATTCAAAGTGATTTTGAGGACACAGCTGATGTATCTCTCCAGGCCCTTCTTTTGCACATGCaacataaaggaaaaaaaaacagaaacataaaAATGGAAGAAATTGAAACATTGCAATtgagtacatttaaaatgttagctggtataattataattaatttaattcaagaAATGAAGAAGCGAGTTGTGCAATGCAGCAGACTATTATTTCTTCCACAGGTTCTCTCACATTTGAATCCCACAAACAGGTCATGGGTTCAAGATTTGttcatattattattgtttttttattattattattattattatatcattgtGTTTTTACTAGCATGGCTAATCCAAAACAGTACAGGGATATACTGTTAATGCctattttagaataaataaaaccagCACAATACACAACACCAGTGTACCATTTTACATACAAAAAGTGGACAAGAGTAAGGTTTAACAGCCCTGACCTAGAATATAGCAACCACAAAAATGTAGATTAACACAAATTTAACTTTCACCAGTGAATCATTTCGAGAAATAGGTCAAATAATCTTAAATAGTTTTACAACTATATGAAATAAGATGAAATCTAGCTACTAGCTACAACTACTAGGTTCAAGATGTGTATATTAATGccacaatatgttttattacgAAGAAAGAAAATTGTAGTTGGGTACAGTCCTTTTGGTCCAATTTAAGAAGACCTGCTCCCATTAATATTCCATTCATCTGAGTCGttacattttttactgtattttcttcctttgttttttcttaCACACTGTCttcattttattactttatgaaTTAGTTTCCTTATTCTCTGATGATGTAACACCAAAGCACTTTCTTATCTTCCCTGAAATGCTTATACTGGACATGTATAATCAAAACAAATTCCACCTTTCTGAACAAGCACTTGAGGTCAGTTTTACACATTGGCCTTGCCATAGATCAATCAGTATAAACAAGTTGTGTGATGCTGACAAACATGTTTTGCTTTCCAAGTATGTTATATAAGTTTTTGGTAcgccatttttgtttttaaaagtttgtCTGATTCATCTCTGTCTTTTAAATACTTGCTATAAACTGCACTCCTCGCAGAGGAATTGGAAAGATTAGAATTAGAGCATGGCAGTGATTGCTGCAGTAAGCAGCTTTATTTGACCTCATGTTTCTCAGAGCACAATTATAACTCAGCTAAACTGTCCTGTTTCAGCTCTGAGCCAATGCAGGGTAATACTCCATGTTTGTGTGGTCCTCTGGATAGTCCTTctaatttactgtataattagTAACCCTGATCAGTGAACAGTGTATTACAGACTTGAAAAGATACAGCACCTCTGAAAGGGACAATCTgcaaaaagtattgaaacagatGTGATGAACAAAAGAAAGTATAAGAATTTTGTCTAACTGGATGCAAGTGCCATAAAATGAGTATTAGAAGAAATGTGAATAATAGGCTACCTTTCTTAGCTTTTGCATATTTATCCTTGCATTTTGTACTCTACGCACAACCtgggctctgttttttttttttttttttttttttttttaaatagcgtTGGGATGTTAAAACATTTACTCTGTTACTCTGAGAGTGTGTTAGAGATTATATTTGATAACACTTGACAGTATTCTTTGTGCTAAAATGCTTATTTGAAACACTGTCCTCAtcctttctttttacttttttttaacttgttgGACTATATCAAGCTT
>XM_007252717.3
TTTCAGTTCAACTTTCTTTAGAGGGGAGAGAAGCAGCGAGAAGGAGCTGCCTGCCTTCAAACTGGGAACTGGACGTACTGGAGTTACTGGACATTCTTACagtagtttaatagtttaaaactCATCTCTGATGACTGTGCTTGTTTTTTCTAACCTCTGGTTTTAGCTGTAGTTTAGCGGGAAGTGAGAAACTCGGGACTGAAGATGGGGAGATAGCCTGGAGACGGAGCTGACATGTTTGAGAGCTGACAAACTAGCAAACACAGTCCAACAAGAAGGCTGGCTCATGTCCGCGGAGACGGTCTTACCTCCGGAGGGGCCTGCAGGGCCAGagcaggagctgcagcagcaggagaCCAGGCTGCTTCTGGATAACTCCCATGacacgtgtacaaatgaaaataatgaaTCATCTGCGACTGCAGACACAGCCAGAATTCCAGCTTCCAGGGAACATTCGGCTGATGAACAGGGCGATGTTTTAGAGGAAAACCACACTCATGGCGACCTTGTAAGAAccCAACCTCAGCCACTGGCTAAGCCTCACCCAGCAGCATGTCTACAGCAGCCCAGTGAGGGAGAGGGTGCCAGGCTGCACAATGGCCTTCATGCAGGGCTGAGTAATGGACACAGAATGCCCCGCGGGGGCACACAGCCTGCAGCTGCTGCCACCGCCGCCGCTGCTTCTTCGTCTGAGAGCAGAAAGCATCCGTCTCCTGTCTCTCAGCGCatgcagaagaagctccgcTCCAGCCTGTCCGTCAACAGcgacagcagcaggaggagcaaAGGCAGCTCCACTGGTTCACACAAACCTGGCTCCTCTCCAGAGGACTGCTGTGTTCATTGCATCCTGGCCTGCCTTTTCTGCGAGTTCCTCACCCTTTGTAACATGGTGGTGGCTCAGGCGTCCTGTGGCACCTGCACTTCGGAggcatgctgctgctgctgctgcgcagATGACCTGGGAGATGACTGCAACTGCCCCTGCGACATGGACTGTGGCATCATGGATGCCTGCTGCGAGTCGTCCGACTGCCTGGAGATCTGTATGGAGTGCTGCGGAATCTGCTTCCCCACATAAGGCTCTGATCACCTACAGCCAGAGCAGACAATGAGACAGAccaaagagggagagagaatgtACATAGATACctgtatgtatttgtatttgtatgtttgtatgtctgttttgtatgtgtgtgtctttgtatgTATGAGGGCTTCACATTTTTCTCCAGTGGAAAAATGCGCCTCTGGACTTAATCAAGTTGGTTAAGCTGACGCTTTCCAGACTGAAAAAGACAATTACATATTCATGTAGAGGacaatgtaaaatacatttattgttctgttttgtCGAGACGTGTCAAATATGCTAATAACTCTTTTACTTAAAGTATTATAGAGTCTTTCCTTTAACTGTCATTTTATACATATTGTTTCCATAATTTCATCCTTTTTCAGAGGTCCTTACGTcttattgaatctagttttttAATACAGTCAGATTTGCGGAATGCAGATGTTCTTAGCCTACAAGGGCAGGCTTCAAATGAGTTTGGTCTGCCCTGAACAACACTGTAATTTCCACAGAGGCATGACTTTTTCACACTGTCAGACGTCAAAGCTTTGTGGGTGTTATATGGGAGTCTTATTTTGGACTTGCTGAAAattacttgttttttctttttctttttttttttaactgaaggtCTGTTTGGTAGGGCCTCCTCTAAGCACTGTCTACTGTAGCTTGCTTTATTACAGggccataaagttttaaaatgagttttccATAAAACTGACAATGAAATGATGGAAAACCGTAACAAACATTTGTGAATGTTGGCATGTAAATACATCTTGGATCTAGTCAATCAAATGTCTGTAAgaatattttacagtaatacAGCTGATTTCAGCATttgtatttaacttttttatttttattggttttaaccaataaatttaaCCAATAAGGAACAACAAAGAACATGAGTTAACAGACTCTTGGCTGCAGCCAAAGTAAGCTGCATTTTTGTGCTGCAACATCATAGAAGGCTGTTTCAAATTGAAGACCCCTTTGTATACAGCCAAGAAATGCAGCTTACATTCAAAGTGATTTTGAGGACACAGCTGATGTATCTCTCCAGGCCCTTCTTTTGCACATGCaacataaaggaaaaaaaaacagaaacataaaAATGGAAGAAATTGAAACATTGCAATtgagtacatttaaaatgttagctggtataattataattaatttaattcaagaAATGAAGAAGCGAGTTGTGCAATGCAGCAGACTATTATTTCTTCCACAGGTTCTCTCACATTTGAATCCCACAAACAGGTCATGGGTTCAAGATTTGttcatattattattgtttttttattattattattattattatatcattgtGTTTTTACTAGCATGGCTAATCCAAAACAGTACAGGGATATACTGTTAATGCctattttagaataaataaaaccagCACAATACACAACACCAGTGTACCATTTTACATACAAAAAGTGGACAAGAGTAAGGTTTAACAGCCCTGACCTAGAATATAGCAACCACAAAAATGTAGATTAACACAAATTTAACTTTCACCAGTGAATCATTTCGAGAAATAGGTCAAATAATCTTAAATAGTTTTACAACTATATGAAATAAGATGAAATCTAGCTACTAGCTACAACTACTAGGTTCAAGATGTGTATATTAATGccacaatatgttttattacgAAGAAAGAAAATTGTAGTTGGGTACAGTCCTTTTGGTCCAATTTAAGAAGACCTGCTCCCATTAATATTCCATTCATCTGAGTCGttacattttttactgtattttcttcctttgttttttcttaCACACTGTCttcattttattactttatgaaTTAGTTTCCTTATTCTCTGATGATGTAACACCAAAGCACTTTCTTATCTTCCCTGAAATGCTTATACTGGACATGTATAATCAAAACAAATTCCACCTTTCTGAACAAGCACTTGAGGTCAGTTTTACACATTGGCCTTGCCATAGATCAATCAGTATAAACAAGTTGTGTGATGCTGACAAACATGTTTTGCTTTCCAAGTATGTTATATAAGTTTTTGGTAcgccatttttgtttttaaaagtttgtCTGATTCATCTCTGTCTTTTAAATACTTGCTATAAACTGCACTCCTCGCAGAGGAATTGGAAAGATTAGAATTAGAGCATGGCAGTGATTGCTGCAGTAAGCAGCTTTATTTGACCTCATGTTTCTCAGAGCACAATTATAACTCAGCTAAACTGTCCTGTTTCAGCTCTGAGCCAATGCAGGGTAATACTCCATGTTTGTGTGGTCCTCTGGATAGTCCTTctaatttactgtataattagTAACCCTGATCAGTGAACAGTGTATTACAGACTTGAAAAGATACAGCACCTCTGAAAGGGACAATCTgcaaaaagtattgaaacagatGTGATGAACAAAAGAAAGTATAAGAATTTTGTCTAACTGGATGCAAGTGCCATAAAATGAGTATTAGAAGAAATGTGAATAATAGGCTACCTTTCTTAGCTTTTGCATATTTATCCTTGCATTTTGTACTCTACGCACAACCtgggctctgttttttttttttttttttttttttttttaaatagcgtTGGGATGTTAAAACATTTACTCTGTTACTCTGAGAGTGTGTTAGAGATTATATTTGATAACACTTGACAGTATTCTTTGTGCTAAAATGCTTATTTGAAACACTGTCCTCAtcctttctttttacttttttttaacttgttgGACTATATCAAGCTT

Function

symbol description
mdfic Orthologous to human MDFIC (MyoD family inhibitor domain containing).

NR:

description
PREDICTED: myoD family inhibitor domain-containing protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007252716.3 True 3892 mRNA 0.40 5 7139851 7170640
XM_007252717.3 False 3845 mRNA 0.40 5 7139851 7170640

Neighbor

gene id symbol gene type direction distance location
foxp2 foxp2 coding upstream 45768 6953016 ~ 7094083 (+)
LOC103047680 LOC108439417 coding upstream 345984 6782248 ~ 6793867 (+)
LOC103021606 yaf2,LOC108439407,LOC102797593,LOC105018284 coding upstream 368490 6757554 ~ 6771361 (+)
zcrb1 zcrb1 coding upstream 435957 6695590 ~ 6703894 (+)
LOC103021937 LOC108439409 coding upstream 507046 6601383 ~ 6632805 (+)
arl1 arl1 coding downstream 378445 7549085 ~ 7553250 (+)
slc5a8 slc5a8 coding downstream 433261 7603901 ~ 7612947 (+)
tmem209 tmem209,LOC107658886,LOC107725925,LOC107583965 coding downstream 450174 7620814 ~ 7631378 (+)
ahcyl2 ahcyl2,LOC106609228,LOC107725924 coding downstream 462753 7633393 ~ 7687547 (+)
LOC103023836 strip2 coding downstream 532472 7703112 ~ 7763123 (+)
G62471 NA non-coding upstream 37192 7102280 ~ 7102659 (+)
LOC111192941 NA non-coding upstream 197066 6924178 ~ 6942785 (+)
G62425 NA non-coding upstream 309842 6798340 ~ 6830009 (+)
G62431 NA non-coding upstream 405023 6734481 ~ 6734828 (+)
G62420 NA non-coding upstream 466393 6665395 ~ 6673458 (+)
G62576 NA non-coding downstream 24136 7194776 ~ 7194982 (+)
G62579 NA non-coding downstream 47843 7218483 ~ 7218703 (+)
G62581 NA non-coding downstream 63484 7234124 ~ 7234439 (+)
G62602 NA non-coding downstream 223063 7393703 ~ 7394496 (+)
G62604 NA non-coding downstream 232451 7403091 ~ 7403311 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 284089 6851230 ~ 6855762 (+)
c7h12orf75 NA other upstream 1145857 5982236 ~ 5993994 (+)
plxnb2 NA other upstream 1172116 5782091 ~ 5967735 (+)
LOC111192936 NA other upstream 1374066 5740555 ~ 5765785 (+)
G61575 NA other upstream 3835853 3296546 ~ 3303998 (+)
rab19 rab19,LOC108425368,LOC106523538 other downstream 1231200 8401840 ~ 8415039 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other downstream 1355578 8526218 ~ 8540123 (+)
LOC111192948 NA other downstream 2260859 9431499 ~ 9440564 (+)
G63051 NA other downstream 2475939 9646579 ~ 9650087 (+)
G63432 NA other downstream 5297410 12468050 ~ 12468902 (+)

Expression


Co-expression Network