terf2


Basic Information

Item Value
gene id terf2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 8415862 ~ 8444288 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015605580.2
GGAGCAGGAAGAGAAGAGGAGTATCgtaagtttctggacgcagttAGAGTCGGGAACAGCGGTCCAGTGTTTACAGTCCTGAACCCGAGTGTTTCCCCTGGTGGCGGGTGGAGGAACTGCGGGCTGGGTGATATTCCTGTATTGGGGGGATGGAGTGGAGCAGAGGTGGGGGCGCTAGTCTCTACGTGGCGTTTCTCCCAGATATGGGAAGTTTTCTGAGCTAGCGGTGGAAAAATACAGATGTAGAAGTTTTTAGATTCAGTAGAACTGTAATGAGAACTCACACACGACTGAATCTGAGTTATCTCCTACTGCGAGGCTCAGACTGCGCCTTTATAAACAACATAAACACAGATTTCCTCCGAGGAGCTGCAGAAACTACTGGAAGTTCTGACTCCTCAGGACTGCAGACACAGCACCATGCCGGGCACTGAGGTAAAACACAGAAAGGGGAAGTCTGCGCTCCCGCAGGACGGGAAAACTAACGGAACCTCCGAGCCGAGTCTGAGGAGTGAGGGTAAAACAGCCGCAGCGGGTCCGTCTGAGGAGAAACAGCAGCCCGCTGGAGACCCTGCTCGCCTGGGTTCATCTGTAGACCTGAAGACCGCGGTCAGCCTACTGTCGCTCACTGCCTGCTTACTGCTGGCGTGGGTTGTAATTCAGCAGAATGCAAGGTTTAATGAAGTGGAGGAGAAATATAGACACTTGCATGAAAAGACAGCTGATCTCCTGCTGCTGGAAGAACGATTGGGCACAGTTTCCAAAAAGggtAGCACAGTTTGGCACCGTAGCGGAACTCGTCAGAACACCGGACTGGACTTCCCGCCACTTAGCAACGATGAGAGGGGGCCAAAGATGGCGTCTCAGCTAAGAGAAACCAGAGTAAACTATTGGGTTTTTGAATTCTACATCTCAAAAGCTTTTGAGGCGTTTAGAAATGAAGAGTACGACAGTTACGTGCAGTTCAGGAATCTTGTCCAAGCTTTGGTCTTCAGACCCGTCAACAACCAAAGCGACGTGATAATCAAACTGCGTTTCATGCAGTTTCTTTCTCAGATAAATGATGGGGACAAACCAGACATTACGTTTCAGAGCTCTTTAACACCGCTGGAATCGGCCCTGACCACACTGGAGAATATCTGTTCCGAAATAGATGTTTCACAGAGTGTTTTGGAGCAAGTTCACACCTCAATCAGGGAAATGCTTGTTATAGTCTGCATTAAGAATGAAAAGTTTGAGAAAGCACGGCTGATGCTTTACAAACACTTTCCCAAAGGAAGGGATTCCGCTGGCAAGAAAAAGCTGTTTGAGGATTTAATCAAAAGGAAGTGCAGCACACACTCTGTGATTAAGTCAGTGTCATACAGTGAATTTAAACAGGACATGCTGGACTTCATTGACAATCTCTACCATCTTCCAGAACCTTTCCTTATCAAGGTATCCAAACTTGCTGAACAAGGTCAGACTATAGATGGTGGGGTTTCAAGAAAGTCCCAAAATGTCAGGGCACCAGATGAGCAGTCATCCACGACAGGCAGAGGTCCACAGATGGCTCAGCTGCCCAGTGAGCAGAGAGTTTCTGCAGATCACTGTCCATTCAGCTCTGAACAAAATGGCCAAGCTGAGAATGGACACAGCTCTGCTGGACCCCTCTCCTCTACAGTATTGGTGCAGCTGAGTCTGAGCATGCTGAGGGCTGTATTTCTAGATCTCGCTGAGCTTTTGCCAGTCTCAGCTCCCTTCTCCCTGGTGCAGGAGGAGGTGGACAGAGAAGCAGTAGAGCAGGAAAGTGGCATAGACCTGGACAGCGATGAGCTTATTCTCAGGCTTTCAGAGACTCCTGTTGATCTGTTATTGCGTGAAACCGAGGAGAGCAGAAGAGCAGGCGGAGAAAGAGTCTTGGATGCCGATCAGCCTGAGCAACAGGGCCAGGAAAATCCAGTGGATTTAACTCTCACAGAAAATGTCTTGGAGAAATCAGGTTGTTACAATGGCTCTGGTTTAACACCACACCAAATCAGAGGTGCAGCTTCAGCTGATCCAGAAAATGCTAACACAAATCAAAATGCCAAGAAACACCCAGGTGCTGCTGGGTCTGTCACAGTAGCGCAGTTAGTGATGGAGGAGGACAGTCAGACCAGTGAGTTTGAAACAGTCGATTCTCAGCTGACCCCCAGCCCGCTGACAGCAGGACATAGTGAGGATGACTTGCTTAACTCACTTCCCACCAATTCCATGCCAGTGAGGAAGAACCGCAGGCCAGCTTCTAGCAGGAAGAGTATTCCCAGTGAACCAGAGCCTGCGTCACCTGAGCAGCCCACAGAGCCACAGAACTGTTCCACTCCCACCAGGGTGGCATCCCCCAGCCCCTCTTCTTCTGACAGCACACCTGTTAAACACCACAACCAGATCAAGAAGAGGAACTGGTTGGATGTGTCAGGAATACCAGACGATTGGAGTGATGAAGAATCACTATTTGGAGCATCTACATCTGTGAAGgcagacaCTAAAGgcactaaaagaaagAAGTGGACTGAGGAGGAGTCGGACTGGGTATGCCAAGGCGTGGCGAAGTACGGAGAAGGACGCTGGGGAAAAATCAAGAATATGTTCCCCTTTCAAGGCCGCACAGCTGTGAATATCAAGGATCGTTGGCGCACAATGAAAAAGCTGAACCTGGCATAAGTCTGAGCTTCCTAGCTCTGGTCCTGGAGTAGCTCTGTCCTGTATCCTGCATGTTCTAATATTTTTCTGGTCCAGTTGATCATATTATTAGGGCGGTTTTCATCCACCAAAACATGCAGGACCATGGGGGTGTTTCACAAAGCCAAATTTCTTAGTTTATCCATAGTCTGGCTTCCTAATAAGAGAACAGCTATAACGTTTCTATTGAAAAGTCCTCACGTGTtgtcttaaaggagaaatccggtgtgaaatggttTTGGGGTGTactgaaacatgataacgagtgtGAACCCCCAGCATACAGAAAAACAacgcttttagccgatgctctcAACAGGTGAACAAAGGTTGGGCTGTTCGacaaaagttcatactcatTATATTTCATTACACCCCatgtccatttcacactgaGTTCTCCTTTTAATTGTCTGGCTAACTAAGAATAGTGTGTTTTTGTAAAATACCACTCTGGACATTCaaatgtaggttttttttttttttttttttttttt
>XM_015605582.2
AAGGAGCAGGAAGAGAAGAGGAGTATCgtaagtttctggacgcagttAGAGTCGGGAACAGCGGTCCAGTGTTTACAGTCCTGAACCCGAGTGTTTCCCCTGGTGGCGGGTGGAGGAACTGCGGGCTGGGTGATATTCCTGTATTGGGGGGATGGAGTGGAGCAGAGGTGGGGGCGCTAGTCTCTACGTGGCGTTTCTCCCAGATATGGGAAGTTTTCTGAGCTAGCGGTGGAAAAATACAGATGTAGAAGTTTTTAGATTCAGTAGAACTGTAATGAGAACTCACACACGACTGAATCTGAGTTATCTCCTACTGCGAGGCTCAGACTGCGCCTTTATAAACAACATAAACACAGATTTCCTCCGAGGAGCTGCAGAAACTACTGGAAGTTCTGACTCCTCAGGACTGCAGACACAGCACCATGCCGGGCACTGAGGTAAAACACAGAAAGGGGAAGTCTGCGCTCCCGCAGGACGGGAAAACTAACGGAACCTCCGAGCCGAGTCTGAGGAGTGAGGGTAAAACAGCCGCAGCGGGTCCGTCTGAGGAGAAACAGCAGCCCGCTGGAGACCCTGCTCGCCTGGGTTCATCTGTAGACCTGAAGACCGCGGTCAGCCTACTGTCGCTCACTGCCTGCTTACTGCTGGCGTGGGTTGTAATTCAGCAGAATGCAAGGTTTAATGAAGTGGAGGAGAAATATAGACACTTGCATGAAAAGACAGCTGATCTCCTGCTGCTGGAAGAACGATTGGGCACAGTTTCCAAAAAGggtAGCACAGTTTGGCACCGTAGCGGAACTCGTCAGAACACCGGACTGGACTTCCCGCCACTTAGCAACGATGAGAGGGGGCCAAAGATGGCGTCTCAGCTAAGAGAAACCAGAGTAAACTATTGGGTTTTTGAATTCTACATCTCAAAAGCTTTTGAGGCGTTTAGAAATGAAGAGTACGACAGTTACGTGCAGTTCAGGAATCTTGTCCAAGCTTTGGTCTTCAGACCCGTCAACAACCAAAGCGACGTGATAATCAAACTGCGTTTCATGCAGTTTCTTTCTCAGATAAATGATGGGGACAAACCAGACATTACGTTTCAGAGCTCTTTAACACCGCTGGAATCGGCCCTGACCACACTGGAGAATATCTGTTCCGAAATAGATGTTTCACAGAGTGTTTTGGAGCAAGTTCACACCTCAATCAGGGAAATGCTTGTTATAGTCTGCATTAAGAATGAAAAGTTTGAGAAAGCACGGCTGATGCTTTACAAACACTTTCCCAAAGGAAGGGATTCCGCTGGCAAGAAAAAGCTGTTTGAGGATTTAATCAAAAGGAAGTGCAGCACACACTCTGTGATTAAGTCAGTGTCATACAGTGAATTTAAACAGGACATGCTGGACTTCATTGACAATCTCTACCATCTTCCAGAACCTTTCCTTATCAAGGTATCCAAACTTGCTGAACAAGGTCAGACTATAGATGGTGGGGTTTCAAGAAAGTCCCAAAATGTCAGGGCACCAGATGAGCAGTCATCCACGACAGGCAGAGGTCCACAGATGGCTCAGCTGCCCAGTGAGCAGAGAGTTTCTGCAGATCACTGTCCATTCAGCTCTGAACAAAATGGCCAAGCTGAGAATGGACACAGCTCTGCTGGACCCCTCTCCTCTACAGTATTGGTGCAGCTGAGTCTGAGCATGCTGAGGGCTGTATTTCTAGATCTCGCTGAGCTTTTGCCAGTCTCAGCTCCCTTCTCCCTGGTGCAGGAGGAGGTGGACAGAGAAGCAGTAGAGCAGGAAAGTGGCATAGACCTGGACAGCGATGAGCTTATTCTCAGGCTTTCAGAGACTCCTGTTGATCTGTTATTGCGTGAAACCGAGGAGAGCAGAAGAGCAGGCGGAGAAAGAGTCTTGGATGCCGATCAGCCTGAGCAACAGGGCCAGGAAAATCCAGTGGATTTAACTCTCACAGAAAATGTCTTGGAGAAATCAGGTTGTTACAATGGCTCTGGTTTAACACCACACCAAATCAGAGGTGCAGCTTCAGCTGATCCAGAAAATGCTAACACAAATCAAAATGCCAAGAAACACCCAGGTGCTGCTGGGTCTGTCACAGTAGCGCAGTTAGTGATGGAGGAGGACAGTCAGACCAGTGAGTTTGAAACAGTCGATTCTCAGCTGACCCCCAGCCCGCTGACAGCAGGACATAGTGAGGATGACTTGCTTAACTCACTTCCCACCAATTCCATGCCAGTGAGGAAGAACCGCAGGCCAGCTTCTAGCAGGAAGAGTATTCCCAGTGAACCAGAGCCTGCGTCACCTGAGCAGCCCACAGAGCCACAGAACTGTTCCACTCCCACCAGGGTGGCATCCCCCAGCCCCTCTTCTTCTGACAGCACACCTGTTAAACACCACAACCAGATCAAGAAGAGGAACTGGTTGGATGTGTCAGGAATACCAGACGATTGGAGTGATGAAGAATCACTATTTGGAGCATCTACATCTGTGAAGgacaCTAAAGgcactaaaagaaagAAGTGGACTGAGGAGGAGTCGGACTGGGTATGCCAAGGCGTGGCGAAGTACGGAGAAGGACGCTGGGGAAAAATCAAGAATATGTTCCCCTTTCAAGGCCGCACAGCTGTGAATATCAAGGATCGTTGGCGCACAATGAAAAAGCTGAACCTGGCATAAGTCTGAGCTTCCTAGCTCTGGTCCTGGAGTAGCTCTGTCCTGTATCCTGCATGTTCTAATATTTTTCTGGTCCAGTTGATCATATTATTAGGGCGGTTTTCATCCACCAAAACATGCAGGACCATGGGGGTGTTTCACAAAGCCAAATTTCTTAGTTTATCCATAGTCTGGCTTCCTAATAAGAGAACAGCTATAACGTTTCTATTGAAAAGTCCTCACGTGTtgtcttaaaggagaaatccggtgtgaaatggttTTGGGGTGTactgaaacatgataacgagtgtGAACCCCCAGCATACAGAAAAACAacgcttttagccgatgctctcAACAGGTGAACAAAGGTTGGGCTGTTCGacaaaagttcatactcatTATATTTCATTACACCCCatgtccatttcacactgaGTTCTCCTTTTAATTGTCTGGCTAACTAAGAATAGTGTGTTTTTGTAAAATACCACTCTGGACATTCaaatgtaggttttttttttttttttttttttttt

Function

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG:

id description
K11111 TERF2, TRF2; telomeric repeat-binding factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015605580.2 True 3200 mRNA 0.48 13 8415862 8444286
XM_015605582.2 False 3199 mRNA 0.48 13 8415862 8444288

Neighbor

gene id symbol gene type direction distance location
cct2 cct2,tcpb coding downstream 14959 8389780 ~ 8400903 (-)
LOC103036771 LOC103036771,LOC108425308 coding downstream 26587 8381497 ~ 8389275 (-)
dgki dgki,LOC108425370 coding downstream 54554 8269640 ~ 8361308 (-)
LOC111192944 NA coding downstream 152113 8253845 ~ 8263749 (-)
LOC103043012 NA coding downstream 162953 8224651 ~ 8252909 (-)
arfgap3 arfgap3,LOC108279714 coding upstream 3022 8447310 ~ 8462554 (-)
LOC103038884 pacsin2,LOC103038884,LOC108279716 coding upstream 19838 8464126 ~ 8496393 (-)
ttll1 ttll1,LOC102779306 coding upstream 53936 8498224 ~ 8507579 (-)
LOC103041774 NA coding upstream 98182 8542470 ~ 8553565 (-)
LOC103042080 LOC108425318 coding upstream 142980 8587268 ~ 8590316 (-)
G62832 NA non-coding downstream 82539 8332508 ~ 8333323 (-)
G62821 NA non-coding downstream 135868 8277685 ~ 8279994 (-)
G62748 NA non-coding downstream 464428 7949835 ~ 7951434 (-)
G62732 NA non-coding downstream 605080 7810553 ~ 7810782 (-)
G62661 tmem209,LOC107583965,LOC107725925,LOC107658886 non-coding downstream 791817 7620926 ~ 7624045 (-)
G62907 NA non-coding upstream 202597 8646885 ~ 8647296 (-)
G62950 NA non-coding upstream 576201 9020489 ~ 9020985 (-)
G63034 NA non-coding upstream 962117 9406405 ~ 9409548 (-)
LOC103022044 NA non-coding upstream 970755 9415043 ~ 9418822 (-)
G63041 NA non-coding upstream 1037912 9482200 ~ 9482517 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 242046 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 796430 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 1556192 6787342 ~ 6859670 (-)
G62484 NA other downstream 1677914 6671610 ~ 6737948 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other upstream 1174373 9618661 ~ 9622788 (-)
G63217 NA other upstream 1870511 10314799 ~ 10411231 (-)
G63516 NA other upstream 3876267 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 3921180 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 4361683 12805971 ~ 13027498 (-)

Expression


Co-expression Network