LOC103044524


Basic Information

Item Value
gene id LOC103044524
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 8517980 ~ 8525037 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015605602.2
GCTCTGAGGGAAGTGGAGGGGAGGAAGCGCGGGGTGCAGATGATGGCGGACCAGTCCTCTTATTTCTATTAAACTGATCAGAAGATCTCTCTGAAACAGCGGCATGGgttctcctcttcctctcaccTCGCTGCGCCTGCTGGTGCCTCCACTGCGTCTCATGTCTGCCTTCATGTGGCAAGTGGTCAAGCAGCAGAAGTTGGAGCATTTTAATAAACTGGAAGAGTACATCCTTCTCCTGATTAAGATGTTTCCAGAGATTCTGAGTGACAGACAGAAGACAGCATTAGTGATGGGTCTCAGAGCGAAGATGATGCTTGAAATGTGTAAAGATGAGGTGCCAGTCGACTTGGAGACGATCAAGGCTCGTCTTCACACCATTGAGTCCAAGgcATCAGGTTCAGAGGTGGAAAATTTGCAGTGTAAATTGTTAAAGCTTATTCTGAGCCTTTTGGATGACCCAGTAAAAAAGGAGCATTTCTTTCAGGAAGTGTTCCCGGTTGAGTATGGTCCTGACTTTGACAAAGCACTACAGGTGTTGGTTGGACATTTTCTCTCCAGGCTGGAACAGCTGCTGCCTGTGCCAAACTTTAAACAGGCTGCTTCTTGGCTGAGTACAGAGACCACCGTTTGGGAGAATGTGGTGGAGAATAATTGGGATCCCAGATACTTGCTGCCTTTGCTTCGAAGTGACTATCAGGGAACTCTGGAGACAAACGGTCTCCCATCTGTTGTTGAGGACAGAGTCATCTCTACTTTGTCTCTGCCACCTTTGACTGATGTGGTCACAGACTGTGAGAGTAATGCTGAAAACCAATCAGAACATTCCGTATGCCTAAAGTGGTCTGTCGAGATAAATCAGAATGGCTCGAGTGTAAACCAGGAAGTAAGCCAGGAGATTGTGACAGATGTGCCGGCCGTTGAAATCTTCACTTCAGTTGAAGTAGAAGACTACATTGTGACTGAGATGATTGCAGAGTCTGAAGCACCAACAGGCAGCCTGCAAGAAGAAGTGCATTTGATGGAGAAAAACATTGAAGAAAGTCTTGTCTGTGAGGTTGAAGAGGAAGCAACGGACATCGCTCAAAGCGAGAATGAGAACAGAGCATCGGCTGACAATGCAGCTCCAGCTGAAATTGACCCTGATGTACATGAACCTGATGTACATGAACCTGATGTACATGAACCTGATGAACATGAATCTGATGTACATGAACCTGAGCCAAGCTCTGTGATCTCTGGCTGTAATTCAGATCTGAAGAACGTCTCTGAAGAAGCTGCTGAGAAAGATCCTCAGACCAACAGTGGCCACCTGCTGAAAGTGGTTGTTCCTAGTCGTCTGATTCCAATAATTAAACAAGTCCGCCTGccttcagtttctctctctcgctgcacTAGTGACCCCGGACCTCTTAaaatggGCTCTGCGGTCTTaaagaaatctgcatcttcCTCAAAAAAAAGAGGCAAGACTAAAGCAAAGATTCAGAAGAAAAGACCGCACGCATGCTCTGAGTGTGGAATGTCCTTCAGGTGCCGGGTAGAGCTCAAAGCACACATGCGAAGACACACTGAAAAAGGACCCTACAAATGTCAGCCCTGTAAGCTGAATTTCAGGACCTATTTCCAGGCTTCTGTCCACCAGCGGAAGTGGCACAGCCAGGTGACATACTCCTGTTCCCAGTGTGACAAGAGCTTTCAGTCAATGAAGACATGGCTTATGCATCGCaaagagcacagagacagaacgaCGCACCGCTGCACCGACTGCGGCAAAGAGTGTATATCCCTGCAGGCTCTGATTAATCACTCCAAGGTTCACAACCACTTGGTGAGCGAACGTTTGCCGGACGCCTACAAATGCATCGCTTGTGGTGAAACTTTCTCCCTGAAAGAGGAATTTGTGAGCCACATGAGAACTCACAAACCTCGTGCCCCAATTGTGGACAGGGACAAAGCAGTAAAGCGCGCAAAGCGTCAACCAGGAGAGTGCCGGTTCTGCGGCCAGACGTTTTCTGTGATCGAGCTGCGGAACCATCTAAAAAGTCATCCGGAGTTTCGGCCTCATCAGTGCGACCACTGCGGCAAGTGTTTTGCCACTCTGCAAAGCCTGCTGGCCCACATATCCAATCACACGGGGGAGAAACCTCACGAATGCGAAGACTGCGGTAAGAAGTTCTTCAGCAGCACTCAGCTGAAGTCCCACATGAAGTGCCATTCCACAGAGAGGCCGTACTGCTGCTCCTACTGCGGGAAGTGCTTCCTCTCCATCGGCAACCTCACTATCCACACCAGGCGGCACACCGGCGAGAAACCGTACGTGTGCTTGGAGTGCGGAAAGGCCTTCAGTTCTGCCGGCTGCCTGCAGGTCCATCGTCGCTGCCACACTGGAGAGAAGCCATACCCCTGCAACATCTGTGGACGAAGCTTCATCGTGTCGAGCCACCGCGTGGTACACATGAGATCACACATGGGCGTGCGCCCTTACTCCTGCGAAATCTGCGGGAAAGCTTTCACGAGGAAACGCTGCTTGAGCGAACACGTGTTCAGCCACAGCGACGTGAAACCCTTTCCATGTTCCATCTGCTCGAAGAGCTTCACTCGCCGTGGCCACCTAAAGAGACACATGCAGTCCCACAGTGGAGACCCCAGCAGTGAAAtcagttaaaaaacaaaacaaagaaaaattaccctgaaaaactaaaaattagtTTAGTCATTCTAACAATTCTTGAATTTGAATATGTGTGACTCAGTTTTGTTGTGGTGTTTACCATGAACTATGTAGAAAGTGCTTAAGAGTTACACAAATCAAAAAGCATTGTTATTAGAATGTTATTATTGTGTCAAGCAGTGTCAGGCAATTCTTCCTTGTATTAATTCATATATTttgcaacaataaaaaaaaactaatggtaatatttatatttgagaaAATGTACACTTTTGTAAGTCTATGCTTGctgtaaagaccaataaaaaatgtgttggaGACAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015605602.2 True 2999 mRNA 0.47 9 8517980 8525037

Neighbor

gene id symbol gene type direction distance location
LOC107197608 LOC107197608,LOC108425361 coding upstream 1446 8510515 ~ 8516534 (+)
ckap4 NA coding upstream 85990 8428552 ~ 8431990 (+)
LOC103021322 LOC108425378,LOC108279462 coding upstream 596756 7820355 ~ 7921224 (+)
smkr1 NA coding upstream 747737 7766846 ~ 7770243 (+)
LOC103023836 strip2 coding upstream 754857 7703112 ~ 7763123 (+)
sapcd1 NA coding downstream 42260 8567297 ~ 8572672 (+)
LOC103045143 LOC108425356,LOC108425352,LOC108280014,LOC103363517,LOC107719870,LOC104927640,LOC107699203 coding downstream 264318 8789355 ~ 8882696 (+)
LOC103042395 LOC108425352,LOC108425356,LOC103363517,LOC107719870,LOC107699203,LOC104927640 coding downstream 531386 9056423 ~ 9168847 (+)
kiaa0930 kiaa0930,zgc:172139,LOC102798964 coding downstream 671095 9196132 ~ 9246664 (+)
phf21b phf21b coding downstream 768783 9293820 ~ 9423281 (+)
G62805 pacsin2,LOC103038884,LOC108279716 non-coding upstream 21691 8464127 ~ 8496289 (+)
G62810 arfgap3 non-coding upstream 62069 8451492 ~ 8455911 (+)
G62807 NA non-coding upstream 83598 8433736 ~ 8434382 (+)
LOC107197604 NA non-coding upstream 143285 8370763 ~ 8374695 (+)
G62710 NA non-coding upstream 566528 7949838 ~ 7951452 (+)
G62873 NA non-coding downstream 531 8525568 ~ 8525767 (+)
G62902 NA non-coding downstream 89181 8614218 ~ 8614523 (+)
G62945 NA non-coding downstream 431714 8956751 ~ 8956951 (+)
G62947 NA non-coding downstream 471631 8996668 ~ 8998907 (+)
G62949 NA non-coding downstream 488662 9013699 ~ 9013925 (+)
rab19 rab19,LOC108425368,LOC106523538 other upstream 102941 8401840 ~ 8415039 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 1662218 6851230 ~ 6855762 (+)
c7h12orf75 NA other upstream 2523986 5982236 ~ 5993994 (+)
plxnb2 NA other upstream 2550245 5782091 ~ 5967735 (+)
LOC111192936 NA other upstream 2752195 5740555 ~ 5765785 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other downstream 1181 8526218 ~ 8540123 (+)
LOC111192948 NA other downstream 906462 9431499 ~ 9440564 (+)
G63051 NA other downstream 1121542 9646579 ~ 9650087 (+)
G63432 NA other downstream 3943013 12468050 ~ 12468902 (+)
LOC111192955 NA other downstream 4631189 13156226 ~ 13161367 (+)

Expression


Co-expression Network