LOC111192892


Basic Information

Item Value
gene id LOC111192892
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 809234 ~ 809997 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671158.1
tgtgtgtgtgatgtagatCACCTGCCTCTCAGCCTGAGAGAAGGCGTGGGAAGCTGTTCTGGACGGCTGGAGGTGTATTACAATAAAACACCGGGGTCTGTATGTGGTGATCAGTGGGACATCAGGGATGCTCAGGTGGTCTGCAGGCAGCTGGGTTGTGGGCCGGCGCTGAGTGCTAATAGAAGTGCTGCTGATGGTTCTGGTGGAGGAACTATCTGGATGAACAGAGTGAAGTGTAGAGGGAATGAGATTCACCTGTGGGACTGTCCTCATTCCCTGAAGAACCACACTGACTGCTCCCACAGTGCTGGAGTCACCTGTGCAGACATAACCGTACCTACTACGACTACTGCACCCACACCAACAACCCCCAACCCCACAGTTGTTCAGACAGAGAAGCGACCAGACCCTCCTCCACAAACTCCTCCACCAGCTGTCCCTCCATCTATCCAGTGTCTCTCCTGGTTCTGGGACTCTGTGCTCTTCCTGGCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671158.1 True 495 mRNA 0.54 3 809234 809997

Neighbor

gene id symbol gene type direction distance location
syt10 syt10,LOC107744086,LOC107656242,LOC107565666,LOC107592193,LOC107658793 coding upstream 28437 749881 ~ 780797 (+)
LOC103021355 LOC103021355,LOC108426405,LOC108279735,LOC107757248,LOC107694301,LOC100694258,LOC107590616 coding upstream 187492 614113 ~ 621742 (+)
LOC107197032 NA coding upstream 219129 586693 ~ 590105 (+)
LOC103022716 NA coding upstream 234733 570221 ~ 574501 (+)
LOC111192919 NA coding upstream 243924 559026 ~ 565310 (+)
LOC111192924 NA coding downstream 31040 841037 ~ 844690 (+)
LOC111192895 NA coding downstream 83372 893369 ~ 912312 (+)
LOC111192896 NA coding downstream 102894 912891 ~ 914305 (+)
LOC111192897 NA coding downstream 109177 919174 ~ 927544 (+)
LOC111192898 NA coding downstream 119613 929610 ~ 943921 (+)
G61011 NA non-coding upstream 8364 800649 ~ 800870 (+)
G60996 NA non-coding upstream 68336 740691 ~ 740898 (+)
G60983 NA non-coding upstream 185799 616774 ~ 623435 (+)
G60910 NA non-coding upstream 338545 455836 ~ 470689 (+)
G60903 NA non-coding upstream 531912 277010 ~ 277322 (+)
G61016 NA non-coding downstream 23990 833987 ~ 835273 (+)
G61023 NA non-coding downstream 31598 841595 ~ 949084 (+)
LOC103039262 NA non-coding downstream 35636 845633 ~ 952485 (+)
LOC111192928 NA non-coding downstream 43714 853711 ~ 858509 (+)
LOC111192927 NA non-coding downstream 104903 914900 ~ 916812 (+)
LOC103045537 NA other upstream 184225 599659 ~ 625009 (+)
LOC103023024 cry1,LOC103023024,LOC108426403,LOC108279922,LOC105900698,LOC107560722 other upstream 250654 539518 ~ 558580 (+)
mrps33 mrps33,LOC106591474,LOC107694294,LOC107725593 other upstream 662460 144189 ~ 146774 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other downstream 43529 853526 ~ 1043316 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other downstream 635638 1445635 ~ 1481418 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other downstream 904820 1714817 ~ 1808930 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other downstream 1111398 1921395 ~ 1935499 (+)
G61575 NA other downstream 2486549 3296546 ~ 3303998 (+)

Expression


Co-expression Network