cracr2a


Basic Information

Item Value
gene id cracr2a
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 1397198 ~ 1404499 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671165.1
AAAGAGCAAGAGCTTGAGCAGCTCTTCCTCAAACAAAGAGGGTTGGAGCATCGGTATCGAGAGCTACACAGTGAGCAGCAGGAGAGTCGGGTGGAGAATATAAAGCTGAAAATGACCAATGAGGAACTCTCTCACGAGCTGGAGAACACCTGTCAGGAGCTCTCATTGGCTCAAGAACAGCTGGCTATTCTGCAGGAGAAGGCCACCAGGCTACAGCAAGAAAGAGAAATGGAGATGTACAGAATCACAGAGGGAttgcagagagagaaacaaagctTAATGAAGCAATTAGACCTCCTCAGaGAAATGAATAAACATTTAAGAGATGAGCGAGATGTCAGCTCTttaAAACGCAACAGCTCGTTGAAGAGACTCACCCGTAAACAGCGACCATCCTCAACGTTGTTGAAAAATTCTGcaaaaagTGAGGATAAAGCTGAAGAACCGGCCCAAACTCCAGACCAGAAGCCTTCAACCACAGTGAACGGCTATGGCCCACACACAGCCTCAGGGTCTCAGCAGAATGCAGACCCAGGCACAGTGGCAGCAAATTCAGGCCAAGATTTGGTGGATGCTCCACCAGAGGGTTGGCCTTTGCGTCGGGTCATTTCCATTGAGGAGGACCACCTCCCACACCTGCTGCAAGGGGACCCTCATCCTCTAATTCATCAGCTGAGTGAGGAAGAGAAGGAACGAGGGGAGGAGGATGCTCAAATAGAACTGAACATGAGCCCCATCTATTCCTCAAATGCTTTCCTAGCCTCTTCTCATTCACCTCGGTCTTCCCCCGTGAAGAAGATCTTCTCGAAACAGAAGAGAGGGAAAGGGGGTGTGCCCTCCTCACCCAGGGGCCAGCCAGTAGGCAAAGAGACTTTGCAGAAGGGTCCACCTGAGGGGACTGTGGCCACCCCAGAACGCCTCTTTAAGGTTATTTTAGTGGGCAACTCAAGTGTGGGCAAGACAGCTTTTCTGCGCCGCTTCTGTGATGGCCATTTCCATGCAACAACAACAGCTACTGTGGGTATTGATTACAGCGTTCGTACTCTGAATCTGGGAAATAGTCATGTGGCTCTTCAGCTGTGGGACACTGCAGGTCAGGAGAGGTATCGAAGTATTACTAAGCAGTTTTTCCGCAAGGCTGATGGGGTGGTGGTGCTCTACGATGTAACCATGCAAAGCAGCTTTAGGTCAGTGCACCCCTGGCTTGTCAGCATACAGGAAGCAGTAGGGGATCCCATTCCTATCATGCTACTTGGCAATAAATCAGACATGGAGAGTATAAGACAGGTGCCGACTAAAGAGGCAAAAAGACTGGCTGAGGAAACCAATTTAATGTTCTATGAGTGCAGTGCTTACACAGGATACAATGTGCTAGAGGCCATGTTACACCTGGCCAGGGTATTGAGGGAGCAAGAGGACAGGGTGTGGGAGAACACAGTGCGACTGGTGGATCAGCCAGTGAAGAAGAAATCCTGCTGCAAGTGAtcgcacatgcacacacaaagactgtatGCCTGTATTTGTGAGGTCTTTTCATTGACCTCTGGACTACTCTACTTAAATGCTGCTCTGCCTACAAATACATATAACCCCAAACCTGAACCTAGACCTTTTAACCCCTTATATAAAAGCTACTTTTTTTGGGGAAAagcccaaatatatatatatatatatataatatatatatatatatatatata

Function

GO: NA

KEGG:

id description
K17199 RASEF, RAB45; Ras and EF-hand domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671165.1 True 1700 mRNA 0.48 11 1397198 1404499

Neighbor

gene id symbol gene type direction distance location
LOC111192900 NA coding upstream 389371 1000887 ~ 1007827 (+)
LOC111192898 NA coding upstream 453277 929610 ~ 943921 (+)
LOC111192897 NA coding upstream 469654 919174 ~ 927544 (+)
LOC111192896 NA coding upstream 482893 912891 ~ 914305 (+)
LOC111192895 NA coding upstream 484886 893369 ~ 912312 (+)
LOC103023715 LOC103023715,LOC108436009,LOC108280003,LOC107562295,LOC107560735,LOC107757236,LOC107694310 coding downstream 226374 1630873 ~ 1693966 (+)
ankrd16 ankrd16 coding downstream 407701 1812200 ~ 1825435 (+)
trnay-gua_2 NA coding downstream 408272 1812771 ~ 1812858 (+)
LOC103022887 gdi2,LOC108436005,LOC108279819,LOC107754057 coding downstream 422341 1826840 ~ 1841427 (+)
LOC103022369 LOC103022369,LOC108436003 coding downstream 437779 1842278 ~ 1845762 (+)
LOC111192863 NA non-coding upstream 346108 1050130 ~ 1051090 (+)
LOC111192923 NA non-coding upstream 348142 1047797 ~ 1049056 (+)
LOC103039262 NA non-coding upstream 444713 845633 ~ 952485 (+)
G61023 NA non-coding upstream 448114 841595 ~ 949084 (+)
LOC111192927 NA non-coding upstream 480386 914900 ~ 916812 (+)
G61085 NA non-coding downstream 100844 1505343 ~ 1505817 (+)
G61100 NA non-coding downstream 204626 1609125 ~ 1621557 (+)
G61131 NA non-coding downstream 354339 1758838 ~ 1761182 (+)
G61132 NA non-coding downstream 385036 1789535 ~ 1790432 (+)
trnay-gua_3 NA non-coding downstream 411516 1816015 ~ 1816102 (+)
G61014 NA other upstream 348142 806565 ~ 1049056 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other upstream 353882 853526 ~ 1043316 (+)
LOC103045537 NA other upstream 772189 599659 ~ 625009 (+)
LOC103023024 cry1,LOC103023024,LOC108426403,LOC108279922,LOC105900698,LOC107560722 other upstream 838618 539518 ~ 558580 (+)
mrps33 mrps33,LOC106591474,LOC107694294,LOC107725593 other upstream 1250424 144189 ~ 146774 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other downstream 41136 1445635 ~ 1481418 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other downstream 310318 1714817 ~ 1808930 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other downstream 516896 1921395 ~ 1935499 (+)
G61575 NA other downstream 1892047 3296546 ~ 3303998 (+)
LOC111192936 NA other downstream 4336056 5740555 ~ 5765785 (+)

Expression


Co-expression Network